CI01000071_04584728_04585430


Basic Information

Item Value
gene id CI01000071_04584728_04585430
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 4584728 ~ 4585721 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000071_04584728_04585430.mRNA
GTCGTATTTTCTCCTGTGGTGTCTGTGTGGAGCGTGCCACACATCCACTCCAGAACAACGACGGCTTTTGCTTGCATCTTCCAGTGTTTCTTCTGTCAGCAAGTTCAGCAGAGCTGCAACTCGTCTAGTGCCAGCCCAGAGGAACCCAGTGAGGAGCACCACGACTGTGAGATGGTAAAAATGACAAAGTCCAAGACCTTCCAGGCCTACCTGCCCAACTGTCACCGAACCTACAGCTGCATCCACTGCCGGGCACATCTCGCCAATCACGATGAGCTCATCTCAAAGCGTGCAGTAAGTCACGTCTCTGCTGTGCTTAGACTCTTATTGTGTCTCCTGACAGCACCCATAATAGGTTTACCAGCCTAACTGACGTACCGTTTTGTGTATGGTATAGTGTGACACCACAGCAGACACTTTGCATCTTGTTTGGTGGATTTAGCAGGATATGTTCGCACAGGAGGCACGTGCCACTCTACCAGATGGCTAAGCTGTTAACACTACTGCAAGAGATGATCCATTTCCCAGTATGCACAGCACCTGTCAGGATCAGTCGGACACTCTTGTAGTTCAGACACGATCTGGGAACAGGTGTTTTCTTTAACCTGTTTGATTTCTTGTTTTCCAGGCTAAAGGGATTTGAAAATTAGATTCTTCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000071_04584728_04585430.mRNA True 660 mRNA 0.48 2 4584728 4585721

Neighbor

gene id symbol gene type direction distance location
CI01000071_04534337_04569325 MAPK1.S, MAPK3, MAPK1, MAPK1.L coding upstream 15403 4534337 ~ 4569325 (+)
CI01000071_04518557_04528364 NA coding upstream 56276 4518557 ~ 4528452 (+)
CI01000071_04500188_04515251 TOP3B.L, TOP3B coding upstream 69477 4500188 ~ 4515251 (+)
CI01000071_04464134_04466967 SDF2L1 coding upstream 117495 4464134 ~ 4467233 (+)
CI01000071_04443263_04450257 GM10705, UBE2L3, BB_R111_JSM90EE7F, UB2L3, UBE2L3B, UBE2L3.S, UBE2L3A coding upstream 133468 4443186 ~ 4451260 (+)
CI01000071_04589416_04602399 YPEL2A, YPEL2B, YPEL1, YPEL2, YPELD, YPELC coding downstream 2603 4588324 ~ 4602495 (+)
CI01000071_04706607_04712020 P2RX2 coding downstream 120886 4706607 ~ 4712223 (+)
CI01000071_04737911_04747060 LZTR1.L, LZTR1 coding downstream 151700 4737421 ~ 4748342 (+)
CI01000071_04751375_04752037 NA coding downstream 165448 4751169 ~ 4752442 (+)
CI01000071_04780189_04798898 AIFM3 coding downstream 194468 4780189 ~ 4798898 (+)
G282807 NA non-coding upstream 53421 4530106 ~ 4531307 (+)
G283008 NA non-coding upstream 111136 4472909 ~ 4473592 (+)
G283007 NA non-coding upstream 111826 4472696 ~ 4472902 (+)
G283006 NA non-coding upstream 112302 4471619 ~ 4472426 (+)
G283005 NA non-coding upstream 113164 4471122 ~ 4471564 (+)
G283025 NA non-coding downstream 42520 4628241 ~ 4628538 (+)
G283026 NA non-coding downstream 42879 4628600 ~ 4628893 (+)
G283029 NA non-coding downstream 44827 4630548 ~ 4630998 (+)
G283051 NA non-coding downstream 102361 4688082 ~ 4688287 (+)
G282838 NA non-coding downstream 106415 4692136 ~ 4696613 (+)
G282080 NA other upstream 1528197 3056084 ~ 3056531 (+)
CI01000071_02815324_02834097 NA other upstream 1756124 2815127 ~ 2835525 (+)
CI01000071_01374449_01376813 NA other upstream 3207058 1373996 ~ 1377670 (+)
G280443 NA other upstream 3662632 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 3781411 791346 ~ 803317 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location