G283007


Basic Information

Item Value
gene id G283007
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 4472696 ~ 4472902 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU320744
GGCTGTCATAACTTGTTTTCATGACAAATGTATTTAAACACATTAAATAATCAAGACATTACTAACAGGTTAAGTAAATATAGGCTAATACAGTGCATATACAAAATGCTCCTCTCTAGAGTTCATTTCTCTAGTGAACTAACATGCTATCGACACTAATATTATTCAGTAGCTCATTTATTAATATCTTTCTGCAGTTGAAACACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320744 True 207 lncRNA 0.30 1 4472696 4472902

Neighbor

gene id symbol gene type direction distance location
CI01000071_04464134_04466967 SDF2L1 coding upstream 5463 4464134 ~ 4467233 (+)
CI01000071_04443263_04450257 GM10705, UBE2L3, BB_R111_JSM90EE7F, UB2L3, UBE2L3B, UBE2L3.S, UBE2L3A coding upstream 21436 4443186 ~ 4451260 (+)
CI01000071_04228627_04229463 PURBB, PURB, PURBA coding upstream 243125 4228627 ~ 4229571 (+)
CI01000071_04206342_04211122 NA coding upstream 261563 4206211 ~ 4211133 (+)
CI01000071_04163270_04188267 MXD1 coding upstream 282123 4163270 ~ 4190573 (+)
CI01000071_04500188_04515251 TOP3B.L, TOP3B coding downstream 27286 4500188 ~ 4515251 (+)
CI01000071_04518557_04528364 NA coding downstream 45655 4518557 ~ 4528452 (+)
CI01000071_04534337_04569325 MAPK1.S, MAPK3, MAPK1, MAPK1.L coding downstream 61435 4534337 ~ 4569325 (+)
CI01000071_04584728_04585430 NA coding downstream 111826 4584728 ~ 4585721 (+)
CI01000071_04589416_04602399 YPEL2A, YPEL2B, YPEL1, YPEL2, YPELD, YPELC coding downstream 115422 4588324 ~ 4602495 (+)
G283006 NA non-coding upstream 270 4471619 ~ 4472426 (+)
G283005 NA non-coding upstream 1132 4471122 ~ 4471564 (+)
G283003 NA non-coding upstream 2254 4469605 ~ 4470442 (+)
G283004 NA non-coding upstream 3362 4469119 ~ 4469334 (+)
G282992 NA non-coding upstream 36140 4436258 ~ 4436556 (+)
G283008 NA non-coding downstream 7 4472909 ~ 4473592 (+)
G282807 NA non-coding downstream 57204 4530106 ~ 4531307 (+)
G282817 NA non-coding downstream 64201 4537103 ~ 4617741 (+)
G283025 NA non-coding downstream 155339 4628241 ~ 4628538 (+)
G283026 NA non-coding downstream 155698 4628600 ~ 4628893 (+)
G282080 NA other upstream 1416165 3056084 ~ 3056531 (+)
CI01000071_02815324_02834097 NA other upstream 1644092 2815127 ~ 2835525 (+)
CI01000071_01374449_01376813 NA other upstream 3095026 1373996 ~ 1377670 (+)
G280443 NA other upstream 3550600 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 3669379 791346 ~ 803317 (+)

Expression


Co-expression Network