G283025


Basic Information

Item Value
gene id G283025
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 4628241 ~ 4628538 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU320764
TCTCACCCCAAATTCAAGCTTCCAAATTTTCAGACTGACTTACACATATTTTTGTCTAGTCTAGAGTCTAGAGCTGTCACAGGAACAGGTGTGATTTCTCAGGATGCCTATTTCAGTCATCTGTCAAGTAAGACATTTTATGCAGAAAGAAAATGCTTACAGCAGCTACTGCATAAGAAACTAAATAGGGTGGAATTTGTTTTTAAATGGGCTTTAAAGTATTACTACCACATATTACGATCAGTTTGGAGATGCTATGATTGTTAAAATGACTGAGACTTATATCAGAGAGAGAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320764 True 298 lncRNA 0.36 1 4628241 4628538

Neighbor

gene id symbol gene type direction distance location
CI01000071_04589416_04602399 YPEL2A, YPEL2B, YPEL1, YPEL2, YPELD, YPELC coding upstream 25746 4588324 ~ 4602495 (+)
CI01000071_04584728_04585430 NA coding upstream 42520 4584728 ~ 4585721 (+)
CI01000071_04534337_04569325 MAPK1.S, MAPK3, MAPK1, MAPK1.L coding upstream 58916 4534337 ~ 4569325 (+)
CI01000071_04518557_04528364 NA coding upstream 99789 4518557 ~ 4528452 (+)
CI01000071_04500188_04515251 TOP3B.L, TOP3B coding upstream 112990 4500188 ~ 4515251 (+)
CI01000071_04706607_04712020 P2RX2 coding downstream 78069 4706607 ~ 4712223 (+)
CI01000071_04737911_04747060 LZTR1.L, LZTR1 coding downstream 108883 4737421 ~ 4748342 (+)
CI01000071_04751375_04752037 NA coding downstream 122631 4751169 ~ 4752442 (+)
CI01000071_04780189_04798898 AIFM3 coding downstream 151651 4780189 ~ 4798898 (+)
CI01000071_04825708_04831021 NA coding downstream 197170 4825708 ~ 4831067 (+)
G282817 NA non-coding upstream 10500 4537103 ~ 4617741 (+)
G282807 NA non-coding upstream 96934 4530106 ~ 4531307 (+)
G283008 NA non-coding upstream 154649 4472909 ~ 4473592 (+)
G283007 NA non-coding upstream 155339 4472696 ~ 4472902 (+)
G283006 NA non-coding upstream 155815 4471619 ~ 4472426 (+)
G283026 NA non-coding downstream 62 4628600 ~ 4628893 (+)
G283029 NA non-coding downstream 2010 4630548 ~ 4630998 (+)
G283051 NA non-coding downstream 59544 4688082 ~ 4688287 (+)
G282838 NA non-coding downstream 63598 4692136 ~ 4696613 (+)
G282813 NA non-coding downstream 69337 4697875 ~ 4703908 (+)
G282080 NA other upstream 1571710 3056084 ~ 3056531 (+)
CI01000071_02815324_02834097 NA other upstream 1799637 2815127 ~ 2835525 (+)
CI01000071_01374449_01376813 NA other upstream 3250571 1373996 ~ 1377670 (+)
G280443 NA other upstream 3706145 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 3824924 791346 ~ 803317 (+)

Expression


Co-expression Network