RNA id: TU320744


Basic Information

Item Value
RNA id TU320744
length 207
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G283007
representative True

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 4472696 ~ 4472902 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GGCTGTCATAACTTGTTTTCATGACAAATGTATTTAAACACATTAAATAATCAAGACATTACTAACAGGTTAAGTAAATATAGGCTAATACAGTGCATATACAAAATGCTCCTCTCTAGAGTTCATTTCTCTAGTGAACTAACATGCTATCGACACTAATATTATTCAGTAGCTCATTTATTAATATCTTTCTGCAGTTGAAACACT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU320743 lncRNA upstream 270 4471619 ~ 4472426 (+) True G283006
TU320742 lncRNA upstream 1132 4471122 ~ 4471564 (+) True G283005
TU320740 lncRNA upstream 2254 4469605 ~ 4470442 (+) True G283003
TU320741 lncRNA upstream 3362 4469119 ~ 4469334 (+) True G283004
TU320729 lncRNA upstream 36140 4436258 ~ 4436556 (+) True G282992
TU320745 lncRNA downstream 7 4472909 ~ 4473592 (+) True G283008
TU320534 lncRNA downstream 57204 4530106 ~ 4531307 (+) True G282807
TU320544 lncRNA downstream 64201 4537103 ~ 4617741 (+) True G282817
TU320764 lncRNA downstream 155339 4628241 ~ 4628538 (+) True G283025
TU320765 lncRNA downstream 155698 4628600 ~ 4628893 (+) True G283026
CI01000071_04464134_04466967.mRNA mRNA upstream 5463 4464134 ~ 4467233 (+) True CI01000071_04464134_04466967
CI01000071_04443263_04450257.mRNA mRNA upstream 21436 4443186 ~ 4451260 (+) True CI01000071_04443263_04450257
CI01000071_04228627_04229463.mRNA mRNA upstream 243125 4228627 ~ 4229571 (+) True CI01000071_04228627_04229463
CI01000071_04206342_04211122.mRNA mRNA upstream 261563 4206211 ~ 4211133 (+) True CI01000071_04206342_04211122
CI01000071_04163270_04188267.mRNA mRNA upstream 282123 4163270 ~ 4190573 (+) True CI01000071_04163270_04188267
CI01000071_04500188_04515251.mRNA mRNA downstream 27286 4500188 ~ 4515251 (+) True CI01000071_04500188_04515251
CI01000071_04518557_04528364.mRNA mRNA downstream 45655 4518557 ~ 4528452 (+) True CI01000071_04518557_04528364
CI01000071_04534337_04569325.mRNA mRNA downstream 61435 4534337 ~ 4569325 (+) True CI01000071_04534337_04569325
CI01000071_04584728_04585430.mRNA mRNA downstream 111826 4584728 ~ 4585721 (+) True CI01000071_04584728_04585430
CI01000071_04589416_04602399.mRNA mRNA downstream 115422 4588324 ~ 4602495 (+) True CI01000071_04589416_04602399
TU319744 other upstream 1416165 3056084 ~ 3056531 (+) True G282080
TU319630 other upstream 1644092 2804644 ~ 2804806 (+) True G281974
TU318234 other upstream 3095026 1375724 ~ 1375792 (+) True G280680
TU317961 other upstream 3550600 905217 ~ 922096 (+) True G280443
TU318001 other upstream 3669379 799775 ~ 799876 (+) True G280464

Expression Profile