G282716


Basic Information

Item Value
gene id G282716
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 3677203 ~ 3681222 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU320433
ATGACAGAATTTTCATTTTTGGGTGAACTAACCCTTTAACTATGTGCAATAGAAATAATGATATCAGCTTTAGCAAACACCATCAAACCATGCATGATAAATTACTCTCTAAAATTGTATGATTTTTGTTAGCACACATCTCAGTTTAGATGACTGGCCAGTTTATTTGTTTATACTGGGCATTTAACTTCCCACAATTCATTGTGAGACCACAGCAGAGAGTTAAATGCATTCAAAGCACACACACTTGCTCTTGGCCTATTAGAAAGGCATATCTGTTTCAGTGTTGTATCTGCGCAGCAGAGAAAGGGGAACATTTTGTACTGTGTCACGAATCAAATAACACAAATTCCTCCAGCAAAGCAAATACGCAGCTTCCAATTAAAAAGCAGATGCATGGTAGGGCATAGCTGTCATTAATGCATACATGTGAACACACGTAGACACCTACACAAACACAGTCAGGTTGAGTCCAGAGGCCGATAAATTTCTTGTTCGTTTGTTGCTCCTGGCTGCATTATTGAGGCTCTATAAGAGCCTACAGATGACTGCTTCTGATCAACCCCCCCAACTTACAGGCTGTTTACCCACATCGCTTTGACAAGATCTCTGCAATGCACACACAGAGAGTTCTGACATGGAGCCAGGAATGCGTAAAATATTTACTTGTGTTGAGGAAGTAAACAAGTGTTCCCTGTTTACTTGTTGGGACCAATCGCATCCTCTAGTTTTAGACTTGAAAGCGTGTGGGGGCGGAGGGTGGATGAGATGAGACGAGCGGCGTCTGTCTGCCACATGAAGGAGAGGAACGCTTCGGATGCTTCGGAATGGAACATGCTGGTGGAACTGTCAGATCAACACGCTCGTTCGAGAGAAATCTCAGCACGCCTCAATGAGCCTTTGGTCAGAAAGCGAATGAGGACACCTAACATCCAGAGGAGATACAGGAAAACAGACAGATGTCTGTGTCGGTTTCTTTACACGGCTATCGGTTAAATCATTTGTGCGTTCATTCAGTAGTAATGAATCAGCTTCAAAAAAGAGCACTCGAATCTTCATTAATCTTAGCGTTAATGTTCTTGCATATAGATTAGTCATAGTTGACTTGAGGTAACTGATCACTTGCTTTTCCTTCAAACTTCCTTTTGTCTGGTGAGTGTAACATATGAATGTGAGTGTGAGTAGTGGTGTCCATGAAGCCTTACTACCCACGAGTCCATCTCTCTCTGGAATACTTGATGCGGATTGCAGCATTCTGCGGTCAAATATCGTCGTATAATGACCGGTTAACTGCATAATTAACCGTTGTCCCTGGCAACCACTGATTTACATTGCCATTTTCTCAGACAGTGCTCCACACTCTCTTTGTCCTCACATAATAATTTCACCTTGAGTCAATATTTCATGTCCAGTCATTTATTGTGTAAGTAGCTGTGTAATAAGTGGGATAATGCACAGTCAGATGCTCATTATCCCAAAATAAACCCTTCATGGTGATATAAGATCCTCTGACTCTACATTATTCCTTACTTATACACCTACTGTATCAGTTGATTCATTTGTGCGTTTGTGAATGGATCAGCCTGTAAAAGAACACACAGAAGCATTATTGCTCTTAGATATAGAGATAGTCATACTTGTACTCGATTTGAGGTAACTGATCACTTGCAGTTTCTTTGCCTACTATTTCATCACCTCTTTGGAGAGATTTGTATAAAGCTTGGATTGCCAATCTTATCCTAAATTCTGCACTTGATATGAACTGTCAGCCTTGTAGTCTTCGTTTTCACATCACAGGCTTCTTCATATTTCACCCTGGAGGTCCACATTCCTGCAGAGTTTAGCTTCTACCCTAATCAAACTCGCTTGCCAGTAATTTTCTTGTAATCCTGAAGAACATAATTGGAGCTAAACTCCGCTGGACAGTGGCTGCGTCTGAAAGCTGGAAAATGCTGGGTATGTAGGTTAATAGACAGTTAAGGGCCTTTCACACTGAGTGCGGTTAAGCAACATGAATGTGCGATGCGATGACGCTCTTGAATCGAAACAATAGATTCCTATGGAGCTAGATCAGGGCAAGATCAGTCGATCAAATCAATTTTCCCCCCATTACCCTGCAATGAAACTGCCCGTTCAATTAGATTTGAGCTGTAGATCATGTGCCCAGAGCCGCTGCTGTTGCACAAAAGGGCGAGATTGGTGGTGATTTTATGAAAACCAGTGTAAACACAGAAGAAAAGTATTCTGGAAGAGAGAAGAGAATGGATGTTGAGTTCTTGTTATCAATGGTGTCTGAGAACAGATTTACTTCATATTTCTTTACACAGAATATCATTTCTATTCATTTTCCACTAAATTATGAGATCTGAAGAGATTGAAAGAGCATACAGAGGGCTATGTGTCTGTTTTTTCCGGGTTCGCATGTGTTTTGAATCAGAGAGCTACTTCTTCATTCTGAGTTCCATACATAAACAACTGAGAGAAACATTTCTACAGATAAAATATGAAGCCAACTAGATATATGGTTATGATGATATATATTCTGTATGTGTTTTTCATGTGGCGTGGGGTATTTTTATAACAATACAAAACACTACAAATAATGCATGCCTATCCATTATATAATCAAAATCCAAGCACTCAATGGTTTAAAGTGGGTTTTGAGCAAAAATAGTAATCTCGTAAATTGTGATGTGTAGCTTGATGTATTTGGTCAAAAGAATTCTCTTAAGCATTATAGATAGTTTGTGTTTCTGGTGTAGTACCAAACTTTATTTATATTAATTACTGTTGTATGTTGTGCAGCAGACGAGGTTAAAGCCAAATGGAAAAACCTATTAGATCCATACACATGGAAAACTGCATTCTCGGTCAGTGCAACCTATCGTGCCGGCGTGAATTAGCTAAAGGTGATCAATCGTTTCGCGTTCAGTGTGAAAGCACCGCTTTATTGCGTCGTGCTCAGTGTGAAAGGGCTGCTTCAGAAGCTTGTCCATAATCAGTTTCGGGAGGTACCTTCAAACACAAACGCTGACTGAGAAGTCATTGACTTATAGAGCACCCAGGCAACCAGTCAGCTGCCTAAGCTTTTGGATGCAGCCAGTGAACCTCCAGAGCCACATTTGTAGAACACTGCCATAGAGGGTAACATATATGCTTTAAAAGGGTTGTGACCCCTATTGACTCTTTTCGGTCTCCTATCCAACAGTTAATCCGACTTATCTAAAATAGTTAGCCAATTAAATTTCAAGTGCGAGTTTCAAGTACAGTCCTTTAACGTTTCACCCAACAAAATAATTGACCTGATTTTTTTTTTTTTTATTATTATTTGAAAAAACTAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320433 True 3342 lncRNA 0.40 3 3677203 3681222

Neighbor

gene id symbol gene type direction distance location
CI01000071_03414821_03439810 GNB1L coding upstream 237393 3414821 ~ 3439810 (+)
CI01000071_03361493_03387786 NA coding upstream 289325 3361493 ~ 3390180 (+)
CI01000071_03329447_03356262 TAOK3A, TAOK3 coding upstream 320051 3329447 ~ 3357152 (+)
CI01000071_03108610_03108994 NA coding upstream 568209 3108444 ~ 3108994 (+)
CI01000071_03062277_03064334 XBP1 coding upstream 612497 3061838 ~ 3064706 (+)
CI01000071_03756518_03756925 NA coding downstream 73534 3754756 ~ 3757404 (+)
CI01000071_03793473_03817709 SEMA4C coding downstream 111496 3792718 ~ 3819100 (+)
CI01000071_03825614_03840052 NA coding downstream 144392 3825614 ~ 3840217 (+)
CI01000071_03857495_03897333 KAT6A coding downstream 176273 3857495 ~ 3897490 (+)
CI01000071_03901048_03909621 AP3M2 coding downstream 219826 3901048 ~ 3910637 (+)
G282564 NA non-coding upstream 198695 3477997 ~ 3478508 (+)
G282169 NA non-coding upstream 234694 3441945 ~ 3442509 (+)
G282161 NA non-coding upstream 359218 3303810 ~ 3317985 (+)
G282198 NA non-coding upstream 399845 3275566 ~ 3277358 (+)
G282844 NA non-coding downstream 144856 3826078 ~ 3826308 (+)
G282853 NA non-coding downstream 322972 4004194 ~ 4004426 (+)
G282855 NA non-coding downstream 324385 4005607 ~ 4005900 (+)
G282857 NA non-coding downstream 327735 4008957 ~ 4104043 (+)
G282798 NA non-coding downstream 386307 4067529 ~ 4070373 (+)
G282080 NA other upstream 620672 3056084 ~ 3056531 (+)
CI01000071_02815324_02834097 NA other upstream 848599 2815127 ~ 2835525 (+)
CI01000071_01374449_01376813 NA other upstream 2299533 1373996 ~ 1377670 (+)
G280443 NA other upstream 2755107 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 2873886 791346 ~ 803317 (+)

Expression


Co-expression Network