G282857


Basic Information

Item Value
gene id G282857
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 4008957 ~ 4104043 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU320584
TAAGCAGATAAACATCAAATTTTCATTTTTGGGTGAACTATCCCTTTAAGCTACATCGCCCAGCTGTATTACTCAGTATATAGTTGACACTTTTTGTTAAGTTCAAAAAAATATCCCAGGTTAATTCAGTAGTTAAGAACACTGTTCAATAGGCCAAAGATAATGTTGAAAAAGTAATTATTTTAATTAATGTCTTGCCCTGGGGCCATTTCTATTTGGGGCTGAACTCCACACCTTTCCAATTACATGCCAATTTCAACACCAACATCTTGTTTCACCTTCTTTTGACCCCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320584 True 295 lncRNA 0.35 2 4008957 4104043

Neighbor

gene id symbol gene type direction distance location
CI01000071_03942074_03954201 TET3 coding upstream 54717 3941975 ~ 3954240 (+)
CI01000071_03901048_03909621 AP3M2 coding upstream 98320 3901048 ~ 3910637 (+)
CI01000071_03857495_03897333 KAT6A coding upstream 111467 3857495 ~ 3897490 (+)
CI01000071_03825614_03840052 NA coding upstream 168740 3825614 ~ 3840217 (+)
CI01000071_03793473_03817709 SEMA4C coding upstream 189857 3792718 ~ 3819100 (+)
CI01000071_04113995_04118019 NA coding downstream 9804 4113847 ~ 4118238 (+)
CI01000071_04129094_04161220 ADD2 coding downstream 25012 4129055 ~ 4161477 (+)
CI01000071_04163270_04188267 MXD1 coding downstream 59227 4163270 ~ 4190573 (+)
CI01000071_04206342_04211122 NA coding downstream 102168 4206211 ~ 4211133 (+)
CI01000071_04228627_04229463 PURBB, PURB, PURBA coding downstream 124584 4228627 ~ 4229571 (+)
G282855 NA non-coding upstream 3057 4005607 ~ 4005900 (+)
G282853 NA non-coding upstream 4531 4004194 ~ 4004426 (+)
G282844 NA non-coding upstream 182649 3826078 ~ 3826308 (+)
G282700 NA non-coding upstream 308275 3605004 ~ 3700682 (+)
G282811 NA non-coding downstream 17873 4121916 ~ 4131934 (+)
G282894 NA non-coding downstream 130391 4234434 ~ 4241083 (+)
G282898 NA non-coding downstream 146086 4250129 ~ 4250341 (+)
G282901 NA non-coding downstream 148512 4252555 ~ 4252959 (+)
G282903 NA non-coding downstream 152294 4256337 ~ 4257047 (+)
G282080 NA other upstream 952426 3056084 ~ 3056531 (+)
CI01000071_02815324_02834097 NA other upstream 1180353 2815127 ~ 2835525 (+)
CI01000071_01374449_01376813 NA other upstream 2631287 1373996 ~ 1377670 (+)
G280443 NA other upstream 3086861 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 3205640 791346 ~ 803317 (+)

Expression


Co-expression Network