G282853


Basic Information

Item Value
gene id G282853
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 4004194 ~ 4004426 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU320580
CGGTAAACAAATCCATCTACATACAATACTTGAGAATGTCTGGAAACGGATTCACATCTTATGTTTTTGTTTTTTTTTCTGCCACAAATGTAAATGACTGCCAATCTCTCATTGTCCATGACATTCCTGATTAAAGAGAGAAATTAATTGTTCACTGAAACATTGAGACATGCAAATACTGTCTTGCTTATGCATTTAAAATCAGCCATGGCTAACCTTTTTTTTTTCATCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320580 True 233 lncRNA 0.33 1 4004194 4004426

Neighbor

gene id symbol gene type direction distance location
CI01000071_03942074_03954201 TET3 coding upstream 49954 3941975 ~ 3954240 (+)
CI01000071_03901048_03909621 AP3M2 coding upstream 93557 3901048 ~ 3910637 (+)
CI01000071_03857495_03897333 KAT6A coding upstream 106704 3857495 ~ 3897490 (+)
CI01000071_03825614_03840052 NA coding upstream 163977 3825614 ~ 3840217 (+)
CI01000071_03793473_03817709 SEMA4C coding upstream 185094 3792718 ~ 3819100 (+)
CI01000071_04007497_04017876 NPFFR1L2 coding downstream 2607 4007033 ~ 4018226 (+)
CI01000071_04113995_04118019 NA coding downstream 109421 4113847 ~ 4118238 (+)
CI01000071_04129094_04161220 ADD2 coding downstream 124629 4129055 ~ 4161477 (+)
CI01000071_04163270_04188267 MXD1 coding downstream 158844 4163270 ~ 4190573 (+)
CI01000071_04206342_04211122 NA coding downstream 201785 4206211 ~ 4211133 (+)
G282844 NA non-coding upstream 177886 3826078 ~ 3826308 (+)
G282700 NA non-coding upstream 303512 3605004 ~ 3700682 (+)
G282714 NA non-coding upstream 314962 3620504 ~ 3689232 (+)
G282716 NA non-coding upstream 322972 3677203 ~ 3681222 (+)
G282564 NA non-coding upstream 525686 3477997 ~ 3478508 (+)
G282855 NA non-coding downstream 1181 4005607 ~ 4005900 (+)
G282857 NA non-coding downstream 4531 4008957 ~ 4104043 (+)
G282798 NA non-coding downstream 63103 4067529 ~ 4070373 (+)
G282825 NA non-coding downstream 81951 4086377 ~ 4087074 (+)
G282811 NA non-coding downstream 117490 4121916 ~ 4131934 (+)
G282080 NA other upstream 947663 3056084 ~ 3056531 (+)
CI01000071_02815324_02834097 NA other upstream 1175590 2815127 ~ 2835525 (+)
CI01000071_01374449_01376813 NA other upstream 2626524 1373996 ~ 1377670 (+)
G280443 NA other upstream 3082098 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 3200877 791346 ~ 803317 (+)

Expression


Co-expression Network