G284338


Basic Information

Item Value
gene id G284338
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 855530 ~ 855877 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU322279
GTTGTCTTTGTCAGTCTAGTTGTCACCAGTGAATATTTCTTAGGGTATAGGCTTATTTTTACAATATCAATTTCTTCTTGTCTTGGCCACAAAATGCTTGTTTACAGTATCATGTTATTGCCTAGAAAAAAGAAAGAAAAGATCAAGATCCACTGAACATACACAGGTAGTGTTGTCATGCTAGATGGGGTAAGATGTATGGAACCCGTCATTAAACAGCCTATTATAGGCTTTTCAGCAAAAACAGTGAAACAATTCAGCATCAAATGTAAAATAACATGTACCGATATAACAAACCATTGTTCTGGCTAGCAAATATTGTAATTAATAAATTGTACAAATTTAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU322279 True 348 lncRNA 0.33 1 855530 855877

Neighbor

gene id symbol gene type direction distance location
CI01000072_00760940_00797319 BRIP1 coding upstream 58211 760940 ~ 797319 (+)
CI01000072_00629638_00638277 LHX1, LHX1A, LHX1.L coding upstream 216179 629638 ~ 639351 (+)
CI01000072_00603805_00621584 NA coding upstream 233697 602642 ~ 621833 (+)
CI01000072_00453946_00487772 NA coding upstream 366896 453741 ~ 488634 (+)
CI01000072_00441183_00448301 NA coding upstream 407058 440626 ~ 448472 (+)
CI01000072_00873737_00876816 NA coding downstream 17860 873737 ~ 876902 (+)
CI01000072_01119954_01120757 NA coding downstream 263426 1119303 ~ 1120844 (+)
CI01000072_01145519_01157117 NA coding downstream 289642 1145519 ~ 1157875 (+)
CI01000072_01163522_01163779 NA coding downstream 307131 1163008 ~ 1163959 (+)
CI01000072_01183833_01210925 KIAA0753 coding downstream 327662 1183539 ~ 1212212 (+)
G284296 NA non-coding upstream 109558 745722 ~ 745972 (+)
G284121 NA non-coding upstream 187519 667773 ~ 668011 (+)
G284117 NA non-coding upstream 192655 662593 ~ 662875 (+)
G284111 NA non-coding upstream 209471 645671 ~ 646059 (+)
G283927 NA non-coding upstream 213470 640429 ~ 642060 (+)
G284464 NA non-coding downstream 212643 1068520 ~ 1069158 (+)
G284550 NA non-coding downstream 477599 1333476 ~ 1333715 (+)
G284559 NA non-coding downstream 525866 1381743 ~ 1442788 (+)
G284696 NA non-coding downstream 731274 1587151 ~ 1590509 (+)
CI01000072_00338411_00351144 NA other upstream 504242 337071 ~ 351288 (+)
G284742 NA other downstream 1125653 1981530 ~ 1985140 (+)
G285428 NA other downstream 3114380 3970257 ~ 3976214 (+)
G286470 NA other downstream 3313227 4169104 ~ 4175651 (+)
CI01000072_04225105_04268007 SIK2B, SIK2 other downstream 3368961 4224789 ~ 4268148 (+)
CI01000072_04338747_04342064 SDHD other downstream 3482842 4338719 ~ 4343266 (+)

Expression


Co-expression Network