Gene
RNA
| Item | Value |
|---|---|
| gene id | G284785 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000072 |
| NCBI id | null |
| chromosome length | 5473029 |
| location | 2237117 ~ 2242589 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU322759 | True | 5166 | lncRNA | 0.38 | 2 | 2237117 | 2242589 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000072_02163279_02183332 | CLUH, CLUHA | coding | upstream | 53636 | 2163279 ~ 2183481 (+) |
| CI01000072_02140839_02148226 | NA | coding | upstream | 88468 | 2140839 ~ 2148649 (+) |
| CI01000072_02109877_02133927 | TLCD2 | coding | upstream | 103088 | 2109877 ~ 2134029 (+) |
| CI01000072_02058184_02067046 | HIF1AL | coding | upstream | 170068 | 2057887 ~ 2067049 (+) |
| CI01000072_02033013_02040077 | NA | coding | upstream | 196392 | 2032977 ~ 2040725 (+) |
| CI01000072_02282323_02282873 | NA | coding | downstream | 39734 | 2282323 ~ 2282992 (+) |
| CI01000072_02290646_02296564 | MNTA | coding | downstream | 47825 | 2290414 ~ 2296761 (+) |
| CI01000072_02326222_02344508 | VPS53 | coding | downstream | 83633 | 2326222 ~ 2345441 (+) |
| CI01000072_02348164_02349155 | FAM101B | coding | downstream | 105043 | 2347632 ~ 2349767 (+) |
| CI01000072_02351008_02356285 | NA | coding | downstream | 108419 | 2351008 ~ 2357080 (+) |
| G284789 | NA | non-coding | upstream | 168757 | 2023415 ~ 2068360 (+) |
| G284876 | NA | non-coding | upstream | 269804 | 1967047 ~ 1967313 (+) |
| G284745 | NA | non-coding | upstream | 297799 | 1937487 ~ 1939318 (+) |
| G284873 | NA | non-coding | upstream | 311928 | 1924112 ~ 1925189 (+) |
| G284872 | NA | non-coding | upstream | 313552 | 1923253 ~ 1923565 (+) |
| G284787 | NA | non-coding | downstream | 122288 | 2364877 ~ 2365224 (+) |
| G284901 | NA | non-coding | downstream | 128092 | 2370681 ~ 2371362 (+) |
| G284907 | NA | non-coding | downstream | 138465 | 2381054 ~ 2381430 (+) |
| G284909 | NA | non-coding | downstream | 139877 | 2382466 ~ 2382677 (+) |
| G284929 | NA | non-coding | downstream | 172711 | 2415300 ~ 2415510 (+) |
| G284742 | NA | other | upstream | 251977 | 1981530 ~ 1985140 (+) |
| CI01000072_00338411_00351144 | NA | other | upstream | 1885829 | 337071 ~ 351288 (+) |
| G285428 | NA | other | downstream | 1727668 | 3970257 ~ 3976214 (+) |
| G286470 | NA | other | downstream | 1926515 | 4169104 ~ 4175651 (+) |
| CI01000072_04225105_04268007 | SIK2B, SIK2 | other | downstream | 1982249 | 4224789 ~ 4268148 (+) |
| CI01000072_04338747_04342064 | SDHD | other | downstream | 2096130 | 4338719 ~ 4343266 (+) |
| CI01000072_04757636_04762507 | NA | other | downstream | 2517722 | 4757583 ~ 4762510 (+) |
