CI01000073_00262918_00263376


Basic Information

Item Value
gene id CI01000073_00262918_00263376
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000073
NCBI id null
chromosome length 1307889
location 262918 ~ 263617 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000073_00262918_00263376.mRNA
ATGTTCAACTCTGTAGTGTACAGCCCTGTTGAACTAATAATAGAGGATCAAAATAACAGCACCAATGTTCTGCAGCTTTGTGATTTTGATGGTGAAATTAATTGGAAGCTTGAAACTATATACCTGCAAAATTTCATTTTCGTTGTTGCATTTGTGATCATTACATTTTGCTACACTGTGATCCTGGCACGGCTGCTTCGACCAACATCTCACACTCGTAAGAAGACAGTGCAGCTCATCCTCTTCATAGTGGTGTTTTTTTTCTTGGGATGGGGGCCATACAACGTGGCCATATTTCTGGACTCTCTTATTGCATGGGGAATCTCTCCTTTTATTGAGTGTGACATCAGTAAATCTATAGACTATTGGATCTACATCTCTCGGATGATGGCTTTCTCACACTGCTGCCTGAATCCTGTGTTTTATGTTTTTATGGGGATAAAATTTAGAAACCACTAAAAATGTTAATGGACTTTCTGTAAGAAGAACAATGAGCCTCAGAATCGAAACAGCAGGCTTATTTACTCCAACGGCGAAGAAAAATCAATGTATTAGACATCTATGCCTAAAAATAACTCCAAAACAATAAGTTTACAACTGATTTTCAGCAACAAAATGAAAGCAATGTGAAGTGTCTGTACTGTAATTGAACAAACTTTTAAAAATGTTCCAATCAATTATATTACTAAAATTGCATGTA

Function

NR:

description
Xcr1a protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000073_00262918_00263376.mRNA True 700 mRNA 0.36 1 262918 263617

Neighbor

gene id symbol gene type direction distance location
CI01000073_00249780_00250877 NA coding upstream 11768 249780 ~ 251150 (+)
CI01000073_00116439_00125912 ACVR2B coding upstream 136816 116439 ~ 126102 (+)
CI01000073_00104834_00107807 CRYGN, CRYGN2, CRYGN1 coding upstream 155041 104834 ~ 107877 (+)
CI01000073_00048073_00049706 NA coding upstream 212406 47933 ~ 50512 (+)
CI01000073_00275690_00276754 NA coding downstream 12073 275690 ~ 277825 (+)
CI01000073_00334163_00334633 NA coding downstream 70215 333832 ~ 335187 (+)
CI01000073_00384381_00387601 VIML coding downstream 120665 384282 ~ 387601 (+)
CI01000073_00396614_00407516 NA coding downstream 132197 395814 ~ 407946 (+)
CI01000073_00478931_00488750 PDE1C, PDE1CB coding downstream 215239 478856 ~ 488754 (+)
G287419 NA non-coding upstream 34731 226621 ~ 228187 (+)
G287397 NA non-coding upstream 55331 200586 ~ 207587 (+)
G287389 NA non-coding upstream 72598 183460 ~ 190320 (+)
G287365 NA non-coding upstream 152503 110105 ~ 110415 (+)
G287364 NA non-coding upstream 152989 109389 ~ 109929 (+)
G287443 NA non-coding downstream 2326 265943 ~ 266152 (+)
G287444 NA non-coding downstream 2749 266366 ~ 266610 (+)
G287445 NA non-coding downstream 3929 267546 ~ 267846 (+)
G287446 NA non-coding downstream 7261 270878 ~ 271283 (+)
G287435 NA non-coding downstream 19755 283372 ~ 283818 (+)
G287391 NA other upstream 63146 190944 ~ 199772 (+)
G287638 NA other downstream 445427 709044 ~ 718401 (+)

Expression


Co-expression Network