G287419


Basic Information

Item Value
gene id G287419
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000073
NCBI id null
chromosome length 1307889
location 226621 ~ 228187 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU325837
CACGCCATCAGGTAGTTTTAATTCAACAGCTCCATATCAAACTAGCTGTAATATAACATTGCTATTATTTCACAGCTCTTTACAGTAACTGTACATAAAAAATGACTGCTTGTCATTCTGATATGCTTACAGTACTCTGATCAAGCTCCATCATCAGCCTCTGAAACATTCAGAAAGTGCAACAGTTTCAATGCTTCTTATTAAAGTATCAATGTTTCTTATTAAAATGTAGCTATTACAAAAAATGTCATTTACAATATCCACCATCTTTAGGCTGGAGTTATTGCACTGCGTTGCTTGCCAAAATAAAAAATCTTATTTATGCAAAAAAACACAGTCACTGAGTTATTGCTTATACATTTTTGCCTGGTGTCAGCTGAAAGAAAATACATTTTTTTTGGTTGATAATAAACAAGACTGCCAGGAATCTTATTTCTGTGTACTTGCCCTTTCAGAATACAGATTTTATGTCTGCATTAAGTCTTATTTGATTTATTAAGCTTTAAAAAAACATGAGGTCCAGAATATGATATACTATGCAATCTCACAAGAAAATATATTAGTTTCCTTTCTATAGATTCTATAATTAAGAAAAACACATTTCAAACAATTTCCTCCGTTTTTAGCATCTGTGTTAGACTTATATTGATATTAGACAGAGATGGTATAAAACAATGGGTAACACTTTACAGAATGTTAAAGAAACATACTGGCGTACCTGTATGTGAGTAACCTGATGTCGTATAAGCATTTTCAACATATCTATATTCACTAATTTAATTACAATACACAATAATAAAGCTCTTCTGTAGTGCATAATCCGCTATCCTTCAACCTTCATCTATTCTACTACTGACCACACAGCTCTCTAAATTTCACTGCATTTCAGAGTCTTCCTGCCATCCATTCCCTTTAGATTCATTGATAAGTATGTCAGAGATATTGTGCCATTCCGGCTATTAGAGTATAAGAGGTTATGAATGAAGAGGAATCATTCATAAGAGGTAAGTAGCTTCTGAATTAGATTTTTAGAAAATAGATTTCTCCATTATTATTAGTACAAGAATTTAAGGGGAAAACAATAGTCCTAAAATTTTCAAAAGTATAATTTCTTATTTCCTTCACTTGATTGTGAAAGCAGCATTCCAAGTTTGGCTTGATAAACAGCCATAATCCTCAACAAGCAGTCCCATGACCTCGCACAGACAGAATAGTGTGCGTGATTATTTTTCCTATGAAGAACAATCACTTCCATTGGCTTCCTCTGGCTCCTCTACACTCAATTTGTACAGGACCTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU325837 True 1299 lncRNA 0.33 2 226621 228187

Neighbor

gene id symbol gene type direction distance location
CI01000073_00116439_00125912 ACVR2B coding upstream 100519 116439 ~ 126102 (+)
CI01000073_00104834_00107807 CRYGN, CRYGN2, CRYGN1 coding upstream 118744 104834 ~ 107877 (+)
CI01000073_00048073_00049706 NA coding upstream 176109 47933 ~ 50512 (+)
CI01000073_00249780_00250877 NA coding downstream 21593 249780 ~ 251150 (+)
CI01000073_00262918_00263376 NA coding downstream 34731 262918 ~ 263617 (+)
CI01000073_00275690_00276754 NA coding downstream 47503 275690 ~ 277825 (+)
CI01000073_00334163_00334633 NA coding downstream 105645 333832 ~ 335187 (+)
CI01000073_00384381_00387601 VIML coding downstream 156095 384282 ~ 387601 (+)
G287397 NA non-coding upstream 19034 200586 ~ 207587 (+)
G287389 NA non-coding upstream 36301 183460 ~ 190320 (+)
G287365 NA non-coding upstream 116206 110105 ~ 110415 (+)
G287364 NA non-coding upstream 116692 109389 ~ 109929 (+)
G287360 NA non-coding upstream 126759 98843 ~ 99862 (+)
G287443 NA non-coding downstream 37756 265943 ~ 266152 (+)
G287444 NA non-coding downstream 38179 266366 ~ 266610 (+)
G287445 NA non-coding downstream 39359 267546 ~ 267846 (+)
G287446 NA non-coding downstream 42691 270878 ~ 271283 (+)
G287435 NA non-coding downstream 55185 283372 ~ 283818 (+)
G287391 NA other upstream 26849 190944 ~ 199772 (+)
G287638 NA other downstream 480857 709044 ~ 718401 (+)

Expression


Co-expression Network