CI01000086_02018950_02030464


Basic Information

Item Value
gene id CI01000086_02018950_02030464
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000086
NCBI id null
chromosome length 2920448
location 2018820 ~ 2030525 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000086_02018950_02030464.mRNA
ACATTCACATTTCCGTTTCCACAGCAAAAGCCCAGAGTCAAATTAATGTCACTTAATATTAATGAGCTGTTGGAACGTTACCAGCCAACGTCAGCGTGATATACTAATAGTCATGAGCTGCCGCTCCCCATTGCTGAACTGCTTTGGGCGTCACCGTAGACGAACGGCCCCCCAAAATGGAGGCAGCAGAAGTGAATTGGTCAGACTGCCGATGCACTCCAGGGTCAACGGATGGTCGCTGCCTCTGCACAGTTTCCAGCTAATAGCCTGGCTGATGTACAGCTTCATGGCCATCTTGATTGGCACTTCGTTTGTTCTGCATTTGGTCACTCACGTGGCGGCCGTAACAATTGATCCTGCGGATCTGAGCGTTCGAAGGAGGAAGGATTATTCCAGCCCTATGCCAGTGTTTGACAACACCAAACATCAACATGTGATTGACAATCTGCACTGCACCCTCTGTGAGGTGGATGTGGGACCTAAAGCCAAACACTGCAGCACTTGCAACAAATGCATCGCAGACTTTGACCATCACTGCAAATGGCTGAACAATTGTGTGGGAGGAAGGAACTACTGGTTCTTTTTCATAACCATCTCCTCTGCTGTTATTGGAATGATCCTCCTCATTCTTGTCGTCTTGTTTGTCTTCATTGAGCACTATGTGAACCCTGCTGTCCTGCGCACTGCGCCGCAGTTTCAGACAGTGAAAGGAAATGGAACGTGGCTGGTATTCCTTCCGGCAGCACCTTTAGAGACCAGCTCTATTAGTCTGCTGGCGTTGGCGTTCATCACCATCCTGCTGGCTCTGGCTGCTCTCTTATTGCTCTCCCACTTACTGTGCTTCCATATTTACTTATTGTCTCATGGAATCAGCACATACGAGTATATCATTAGGAAGCGCCAGTCACCTAACCCCGAAGAGAAAGAGCAGGTTCCTCCTGCGCTGCCGTCTAATGGAACCACCGCGCAGAGTCTAGGGCCGCTGGAATCACCTGTGAACTGTGAAGCTCCGCTGTCCAGCAGGTCTTGTACCTTCAAACTGGAAGATAGAGGACCAACATCTAGTCGACTGCCAGAACCCATCTGTGCTGAGATGGAGGAAATCAGTGGAGAGAAACATCTGGACTACAGCTCTCAATCACCAACACAAATGATTCCAGGTGAACCTATGATGTCACTTCCTGTGGTCTGGAACCTCAGCGGGATAGAGAAGCCTCAAGCTCCAGGTCGGAGCGACGTGAAGTCTGTGGAGGGACGGCCCATCGTACAAGACCCGCTGGGAAGCTCCATCATGGATGCAGCGGTGGTTCATCAGCAGCTGATGACTGACACGCAGACAGAGGCCTTGCATCCTCAGTATTTAGGGTTCAGAGAGCAGATGCCATAAGTTCAAGCCCACTGATCGTCTCATGCATATTGCACACAAAAACCGCAAGATCCGGCTAAAATCTTTTATATTTTATTGAATATTTGAGATATTTCGTTTTGTTTGAGGCACAAATTTTTTACAGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000086_02018950_02030464.mRNA True 1517 mRNA 0.49 11 2018820 2030525

Neighbor

gene id symbol gene type direction distance location
CI01000086_01994840_02008387 TPPP coding downstream 10433 1994595 ~ 2008387 (-)
CI01000086_01948087_01983560 SPIRE1 coding downstream 35260 1948007 ~ 1983560 (-)
CI01000086_01915013_01921794 AZIN1A coding downstream 97026 1915013 ~ 1921794 (-)
CI01000086_01852638_01897719 UBR5 coding downstream 121101 1852146 ~ 1897719 (-)
CI01000086_01670242_01672517 NA coding downstream 344324 1669788 ~ 1674496 (-)
CI01000086_02032793_02044182 BRD9 coding upstream 2187 2032712 ~ 2044182 (-)
CI01000086_02192695_02193522 NA coding upstream 162110 2192635 ~ 2193766 (-)
CI01000086_02366362_02373059 SLC6A20 coding upstream 335743 2364331 ~ 2373059 (-)
CI01000086_02400288_02400580 NA coding upstream 369333 2399858 ~ 2400608 (-)
CI01000086_02403053_02403317 ZNRF2 coding upstream 372347 2402872 ~ 2403317 (-)
G299494 NA non-coding downstream 14720 1989026 ~ 2004100 (-)
G299489 NA non-coding downstream 42866 1926668 ~ 1975954 (-)
G299493 NA non-coding downstream 106080 1911678 ~ 1912740 (-)
G299571 NA non-coding downstream 125110 1893007 ~ 1893710 (-)
G299478 NA non-coding downstream 177550 1806086 ~ 1841270 (-)
G299488 NA non-coding upstream 22782 2053307 ~ 2054269 (-)
G299589 NA non-coding upstream 31693 2062218 ~ 2063338 (-)
G299625 NA non-coding upstream 58589 2089114 ~ 2089377 (-)
G299626 NA non-coding upstream 59885 2090410 ~ 2090661 (-)
G299650 NA non-coding upstream 108771 2139296 ~ 2139624 (-)
G299528 NA other downstream 323643 1668206 ~ 1695177 (-)
CI01000086_01257926_01260025 SERPINB1L4, SERPINB14 other downstream 757583 1257926 ~ 1260025 (-)
G299107 NA other downstream 892022 1126738 ~ 1126798 (-)
G299173 NA other downstream 1250941 765617 ~ 767879 (-)
G299598 NA other upstream 835157 2865682 ~ 2868103 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_011097 zdhhc11 coding NC_007127.7 CM002900.2 52901490 ~ 52916248 (-)