CI01000093_01042275_01068202


Basic Information

Item Value
gene id CI01000093_01042275_01068202
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000093
NCBI id null
chromosome length 1475560
location 1041650 ~ 1068202 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000093_01042275_01068202.mRNA
ATTTCATGTGAACCTTCAGTGTGGTTCTCATTCCGATGCTGATGTTGCTCTGCACTTTAACCCTCGCTGGGAGAGCACTGGGTATGTAGTGAACAACACCTACCAGAACAGGAACTGGGGCTCAGAGGAACGCAATTCGCGTGCACCCAGTCCCAACCGTGCCAATCAAGCAGCACCTGAGGACAAAAGAGAGAGAAGCCCCCATTCACAGCCTTGTAGGGTGCTTCCTCAGTGGAAGAGGGGAAAGCGGCGTACTGCTGGCACACTTGTTTTTCCTGGAACATCTGGAAGCATGAGAGTGTGGAGTCACACTAAGCAGGTCTTTGCAGCTGGCTACAGGCATAACACTCAAAGTGTTATCGGCCTTTATCCTTGTTTGCATTTTAGTTTTCTGGCAGACAATATTCCAGGGGGGCTTGCAGGAAGGGAAGAGCATCATCGTGAGTGGAACGGTTTTGCCAAATGCCAACAGGAGTATTATAGTGGCATGGCTAGTTTTGTGTACAGTTTTCATTCTGTGTTGTACAGAGTTCATGTGAACCTTGAGTGTGGTGATGATATTGCTCTGCACTTTAACCCACGCTATGATGGTGGCCCTGCATATGTGGTGTTAAACACTCTTCAAAAGGGTAACTGGGGCACAGAGGAACACAAGTATGAATCTCCCATTCTTCAAGGCAAACCACTCATCCTGCAGATACTTGTGACCAAACAGACATACAAGATAAGTGTCAACGGGAAACACTTCATGGACTACAAACACCGTATTCCTATCACTGGGGTGAAAAGTATGTTTGTGAATGATATGGTGAATCTGGATTTCATTGCCTACCAGAAGCCTGAGGTGGTCCCATACAAAACCTTGTTCAAAAATGGACTACAGCCTGGCAAAGACATTGTCATTTATGGACTTCCTAACCCTGACTGTAAAAGGATCGAGATGAATTTCCGTCACAAATATGGGATTGCATTTCACTACCTATCCTATTTTGATGCGAATGTGGTTGTCCGCAACACCTTTGAGAACGGGGCGTGGGGAAAAGAAGAAAGGAGTGGAGGTGTGCCTTTTAAAAAAGATGAACTCTTTAAGGTCACCATCTCCTGCGATAAAGACCAGTTCACTGTGTTTGTGAATGACCAGCAAGCACATACTTACAAGCATCGCTTTGCTAAACTGGAGGACATTGACGTCTTTGAAATTTATGGAGACTTGCAACTGATTTTTGTGAAACCCTTATAAGGATCCAGGTTTATAGGAAGTGCATATTTAAAACTTCCCCTAATGAGTTATCATATGCTTAAAAAATATAACAAAGTGCTAGATTATTTACAAATTGTAGTCGATTAGTGATTCCACATTACCTAACAAAAATTGTACATTTAAGGTAATGTAATTGGACTACTTTTGGATACTTGGATACATTTTTTAAATTAAAATAAATAATTTTAAAATTAAAACAATCAAAATAAAACGCTTTCTAAAAAGATTAAATATTTTGTTTTGCTGCATGTCATGTGATCATTAACCGACATCAGAGAACCAAAAGGCTTGTTCAAGATGAACTACACTAGCCTTCCACCAGCTGGCGAGATCTGCCCATTGCAGGCGGGGGAGGAGTACAGAGATGGCTTTCAGGTCCAAGTAGCACTTTGTGCCTTCCATAATGTGCTGAACTAACATCATTCATGGCAGACCACACAATTTTTGCATTGATTGCAGCCGAAGAAGTGGATGCAACTGAAATAAGAATGCATACTTGCTAGATAGCTTAATCTTAATTTATGTTAATGTTTTGTGTGTTTTGTTTGAATATCAGATATTCAGTATCAACATTGGTTAAAGGAAAAAAAGGGGGGAAAATAAA

Function

NR:

description
Zgc:92326 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000093_01042275_01068202.mRNA False 1865 mRNA 0.41 10 1041650 1068202

Neighbor

gene id symbol gene type direction distance location
CI01000093_01024056_01030224 NA coding downstream 11312 1022996 ~ 1030338 (-)
CI01000093_00929066_00991259 NF1A, NF1 coding downstream 50391 929066 ~ 991259 (-)
CI01000093_00906831_00917953 AKAP1B coding downstream 122920 906486 ~ 918730 (-)
CI01000093_00885214_00889462 NA coding downstream 152076 884976 ~ 889574 (-)
CI01000093_00841300_00846650 NA coding downstream 194523 836236 ~ 850001 (-)
CI01000093_01082814_01125194 NA coding upstream 13336 1081538 ~ 1125536 (-)
CI01000093_01136960_01147480 NA coding upstream 68758 1136960 ~ 1147480 (-)
CI01000093_01155146_01166220 CUEDC1B coding upstream 86576 1154778 ~ 1166220 (-)
CI01000093_01189004_01193556 NA coding upstream 120345 1188547 ~ 1193673 (-)
CI01000093_01208954_01210829 RAB1A, BRAFLDRAFT_276199 coding upstream 140735 1208937 ~ 1210829 (-)
G307738 NA non-coding downstream 143283 897958 ~ 898367 (-)
G307550 NA non-coding downstream 187798 780328 ~ 853852 (-)
G307554 NA non-coding downstream 206988 823658 ~ 834662 (-)
CI01000093_00777884_00821939 NA non-coding downstream 218592 774733 ~ 823058 (-)
G307555 NA non-coding downstream 277953 747449 ~ 763697 (-)
G307753 NA non-coding upstream 764 1068966 ~ 1070452 (-)
G307757 NA non-coding upstream 60676 1128878 ~ 1129105 (-)
G307587 NA non-coding upstream 116708 1184910 ~ 1192058 (-)
G307563 NA non-coding upstream 136173 1204375 ~ 1204759 (-)
CI01000093_01231795_01232733 OR118-1 non-coding upstream 165881 1231291 ~ 1234697 (-)
G307536 NA non-coding downstream 4598 990661 ~ 1063421 (-)
G307804 NA non-coding upstream 205241 1278994 ~ 1279260 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_009334 lgals9l4 coding NC_007126.7 CM002899.2 31022014 ~ 31027112 (-)