CI01000098_02499574_02514594 (DAB1, DAB1B)


Basic Information

Item Value
gene id CI01000098_02499574_02514594
gene name DAB1, DAB1B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000098
NCBI id null
chromosome length 3223972
location 2499574 ~ 2514594 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000098_02499574_02514594.mRNA
CAGGATCGCAGCGAGCAGGCTCTGATTCAGCGCTTCAGAGGGGATGGCATCAGTTACAAGGCCAAACTGATTGGGATTGATGATGTGACGGCCACACGTGGTGACAAGCTATGTCAGGACTCCATGATGAAGCTAAAGGGAATTGCTGCCTCAGCACGGTCAAAAGGGAACCACAAACAGAGAATATTCTTGACTGTGTCTTTTGGTGGAATCAAGATTTATGATGAGAGATCAGGGGTCTTACAACACCATCACTCTGTACACGAAATCTCCTACATTGCCAAAGACACAAGAGACCATCGCGCCTTTGGCTATGTGTGTGGGAAAAAAGGCAACCACAAATTTGTGGCAATCAAGACAAGCCATTCGGCAGAGCCGGTTATACTGGACCTGCGTGACCTTTTCACCCTTGTCTATGACATCAAACAGAGGGAGGAGTCACAAAAAAAGTCTCAGAAGGACAAGCACTGTGAACAAGCCATCTATCAGACGATTCTGGAAGATGAGATTGATGATCCAGTCTATCAGTACATTGTGTTTGAAGCTGGACACGAGCCCCTCCATGGCCACCAATCAGAGGAGAGCGTTTACCAGGTCCCCACAAGTCATCAGAAAGACGGGATCTATGATGTTCCAAAACACCATATGACTAATATAAACCAGTTTGATCTTTTTGGTGACATGGCCACCCCCCCAGACATCCTTTCAATGCCAGCGTCGCCTGCTACCACACTGGATCCTGGAAGGAGACGACGTCAGCACCGCCCAGAACTCTTTACTCATTTTAGCCCACCAGCTGTGCCCTCAGGTTATATGACCATGGGTGCTATCCAGGCTGCTCACTGGACCCAACAATCATTTGCTACCCAGGCTACTCCAATGGCCTTCGGGGTTCAGGCACCATTGCAGGTGGCCCAGATGCTTCCTGGAGGCCAGCCTGTGATTTGGGGTCAAGCAAACCTCTTCCACTCTCCGGCCACTGGCCAGCAGCAATGGGCGTTTGTACCAGCCCAGACAGTTGGCATGGGGGCGCATCCAATTCCAGCCGCAGTGCTTCAGGGTCTGGTCCCCATAGCTGCCATGCGCCCCCACTCCTGTGAACCTCCTGAGGCTTCGTCGAACATCGTGAGTCCTCAGCACTTTGTAGATTCTACCCTGCGGCAGAGTGGATCTAAGGACGCACTAAACAAAGACCCCGAGGAGGAATCCATAGCTGTTCACATTTGCACAAGCAAACATGACACTGCACAGCCCTCTGGGAAAGAGGAAATGGACTGCATTGCTGAGCTTGATTTTTCACAGATGAAATTGACTTCAGGGTCATTACCACTATCCCCAACTGACTCCTGT

Function

symbol description
dab1b Predicted to be involved in lateral motor column neuron migration and ventral spinal cord development. Predicted to be active in cytoplasm. Is expressed in several structures, including blood; digestive system; immature eye; nervous system; and otic vesicle. Human ortholog(s) of this gene implicated in spinocerebellar ataxia type 37. Orthologous to human DAB1 (DAB adaptor protein 1).
dab1 Predicted to enable phosphatidylinositol 3-kinase binding activity. Predicted to be involved in lateral motor column neuron migration and ventral spinal cord development. Predicted to act upstream of or within several processes, including adult walking behavior; negative regulation of receptor signaling pathway via JAK-STAT; and nervous system development. Located in intracellular membrane-bounded organelle. Implicated in spinocerebellar ataxia type 37. Biomarker of autistic disorder.

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000098_02499574_02514594.mRNA True 1350 mRNA 0.51 10 2499574 2514594

Neighbor

gene id symbol gene type direction distance location
CI01000098_02473023_02489273 C8B coding downstream 10301 2472938 ~ 2489273 (-)
CI01000098_02437817_02445376 NA coding downstream 54198 2437817 ~ 2445376 (-)
CI01000098_02419158_02430232 GPAA1 coding downstream 68497 2419001 ~ 2431077 (-)
CI01000098_02405598_02411336 NA coding downstream 88238 2404653 ~ 2411336 (-)
CI01000098_02323797_02348141 NA coding downstream 151433 2323477 ~ 2348141 (-)
CI01000098_02570727_02576978 PRKACB coding upstream 54440 2569034 ~ 2576978 (-)
CI01000098_02590918_02600564 NA coding upstream 75660 2590254 ~ 2600802 (-)
CI01000098_02609412_02690089 NA coding upstream 94026 2608620 ~ 2690089 (-)
CI01000098_02764782_02794031 NA coding upstream 249915 2764509 ~ 2795118 (-)
CI01000098_02807742_02809626 NA coding upstream 291577 2806171 ~ 2809744 (-)
G314975 NA non-coding downstream 41476 2457624 ~ 2458098 (-)
G314942 NA non-coding downstream 154860 2340119 ~ 2344714 (-)
G314935 NA non-coding downstream 186076 2313227 ~ 2313498 (-)
G314914 NA non-coding downstream 245072 2249130 ~ 2254502 (-)
G314895 NA non-coding downstream 281867 2214622 ~ 2217707 (-)
G315037 NA non-coding upstream 32370 2546964 ~ 2547163 (-)
G315045 NA non-coding upstream 87531 2602125 ~ 2602341 (-)
G315068 NA non-coding upstream 291156 2805750 ~ 2805959 (-)
G314830 NA other downstream 398757 2063338 ~ 2100817 (-)
CI01000098_00525874_00530211 NA other downstream 1971019 525701 ~ 530266 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016074 dab1b coding NC_007113.7 CM002886.2 1522721 ~ 1569250 (-)