G313006


Basic Information

Item Value
gene id G313006
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000098
NCBI id null
chromosome length 3223972
location 230348 ~ 230576 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU355860
TCATGGTTCTGGTCAAGTATTCTGTAACTGGTCAAGTGTTCTTGAACTGAAGTCCACTGGAGGCAAGTTTGCAAAAGAACCCAAGTGCAGTTTATTTAAAACAAACATGAATCCACACATGACACAAAAGAAATGATGGCATGGCATGACTTGGCTTAACAATGAACAAGGAAAACATGAGGGCTTAAATGCACAGAGACTCATGACATAATAAGACACATCTGAAAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU355860 True 229 lncRNA 0.39 1 230348 230576

Neighbor

gene id symbol gene type direction distance location
CI01000098_00176829_00219542 NA coding upstream 10806 176829 ~ 219542 (+)
CI01000098_00152510_00154925 NA coding upstream 75042 152218 ~ 155306 (+)
CI01000098_00088670_00090682 KGUA, GUK1A, GUK1 coding upstream 139637 88670 ~ 90711 (+)
CI01000098_00021120_00023861 NA coding upstream 205378 21120 ~ 24970 (+)
CI01000098_00015532_00021007 NA coding upstream 209267 15532 ~ 21081 (+)
CI01000098_00274963_00275658 NA coding downstream 44155 274731 ~ 275712 (+)
CI01000098_00301943_00303337 NA coding downstream 71367 301943 ~ 303544 (+)
CI01000098_00438241_00447948 USP14 coding downstream 207665 438241 ~ 448016 (+)
CI01000098_00470832_00473215 NA coding downstream 239853 470429 ~ 473640 (+)
CI01000098_00652733_00677992 PHLPP1 coding downstream 422157 652733 ~ 679210 (+)
G313005 NA non-coding upstream 1455 228553 ~ 228893 (+)
G313003 NA non-coding upstream 3008 227133 ~ 227340 (+)
G312991 NA non-coding upstream 58516 171540 ~ 171832 (+)
G312989 NA non-coding upstream 60925 168902 ~ 169423 (+)
G312943 NA non-coding upstream 87274 140698 ~ 143074 (+)
G313007 NA non-coding downstream 260 230836 ~ 231121 (+)
G313008 NA non-coding downstream 557 231133 ~ 232371 (+)
G313010 NA non-coding downstream 3656 234232 ~ 234450 (+)
G313011 NA non-coding downstream 4156 234732 ~ 234937 (+)
G313012 NA non-coding downstream 4512 235088 ~ 235309 (+)
G313412 NA other downstream 634053 864629 ~ 865947 (+)
G314121 NA other downstream 1524564 1755140 ~ 1760972 (+)
G314278 NA other downstream 1998748 2229324 ~ 2234831 (+)
CI01000098_02167217_02267829 NA other downstream 2017540 2167217 ~ 2267829 (+)

Expression


Co-expression Network