G313456


Basic Information

Item Value
gene id G313456
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000098
NCBI id null
chromosome length 3223972
location 958532 ~ 958788 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU356366
CAAAGACTTCAGCCAACATGGCCACTATGTCAGAGTCTCCTGTAATCATGGATGCTATGCCTGAGTCTCCTGATGTCACAGCCATCATGCCAGAACCCTGGCAGATATTTCAAAGCCTGGAGGATTTAGAGACCTCTCTACCACTGATTGCTCTCCCTGTTATGGTGGTGGCAATAATGTATGTTTGGGCTGCACACTGCTCTTCAGCTCGTATCGAAGTCTATGAACTTCCTTTTTGTCCTGAAGCGACCATGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU356366 True 257 lncRNA 0.48 1 958532 958788

Neighbor

gene id symbol gene type direction distance location
CI01000098_00899135_00921462 NA coding upstream 36808 899077 ~ 921724 (+)
CI01000098_00894309_00897316 NA coding upstream 61145 894309 ~ 897387 (+)
CI01000098_00791105_00826150 MOV10L1 coding upstream 132368 791105 ~ 826164 (+)
CI01000098_00652733_00677992 PHLPP1 coding upstream 279322 652733 ~ 679210 (+)
CI01000098_00470832_00473215 NA coding upstream 484892 470429 ~ 473640 (+)
CI01000098_00987638_00993102 NA coding downstream 28850 987638 ~ 993102 (+)
CI01000098_00996891_01000102 NA coding downstream 38103 996891 ~ 1000275 (+)
CI01000098_01071463_01072189 NA coding downstream 112675 1071463 ~ 1072428 (+)
CI01000098_01084929_01096605 IRF4A, IRF4 coding downstream 126141 1084929 ~ 1097920 (+)
CI01000098_01176785_01212612 NA coding downstream 217899 1176687 ~ 1213367 (+)
G313441 NA non-coding upstream 27198 923476 ~ 931334 (+)
G313448 NA non-coding upstream 77929 880209 ~ 880603 (+)
G313419 NA non-coding upstream 79545 878359 ~ 878987 (+)
G313418 NA non-coding upstream 80304 877932 ~ 878228 (+)
G313401 NA non-coding upstream 110969 847328 ~ 847563 (+)
G313457 NA non-coding downstream 39 958827 ~ 959068 (+)
G313447 NA non-coding downstream 2490 961278 ~ 961511 (+)
G313438 NA non-coding downstream 20604 979392 ~ 980793 (+)
G313430 NA non-coding downstream 51529 1010317 ~ 1012028 (+)
G313473 NA non-coding downstream 177165 1135953 ~ 1510130 (+)
G313412 NA other upstream 92585 864629 ~ 865947 (+)
CI01000098_00274963_00275658 NA other upstream 683275 274731 ~ 275712 (+)
G314121 NA other downstream 796352 1755140 ~ 1760972 (+)
G314278 NA other downstream 1270536 2229324 ~ 2234831 (+)
CI01000098_02167217_02267829 NA other downstream 1289328 2167217 ~ 2267829 (+)
G314652 NA other downstream 2242732 3201520 ~ 3204360 (+)

Expression


Co-expression Network