CI01000098_01071463_01072189


Basic Information

Item Value
gene id CI01000098_01071463_01072189
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000098
NCBI id null
chromosome length 3223972
location 1071463 ~ 1072428 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000098_01071463_01072189.mRNA
ATGGGGTCTGTAGGATTTCTTCAAAATGTGAACGTTCATCCTCTTGCAACATCAAAGTTGCAAGACGAAGTTGAATGCTTAAGTGTGACACTGGTGGTGGCGTACATTATGACTGTGACTACTCTGGGATGGCAGGAGGCTCTGGCTGCGGTGAAGGTGGCGAGACCTTGTGCTTCACCCAATGCGGGCTTCCAGACCCAGCTGCAGGTGTTTGAGAGCACTCAACTACAGCAGGTGATTCCTTCACATTTGATGACTGAAATTACATTGTCAGCAGTTAGCACCCAAATGCAATTACATGATATTGACGAAGATGTCAGTTCAACTTAAGCCAGCAGGAGAAATCGAAACAAATGAGTGCAGCACACACAAAGAAAACATGCTGCTGTAAAAATTCAAAATGTGGAGGTTTTTGTGCTGTTTTCCGCATGATTGAAATCACGATTGAACCTCATGAATTCATGTTTCAAAAGGGTTTGTTGTTGTTGTGATTTTTTTTGTCGCAGTATCAAACCTGACGACTTTACCTTTGACTTCGAATTATGTCAATGACCATGTTTAAATGCGCA

Function

NR:

description
Dual specificity phosphatase 22b

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000098_01071463_01072189.mRNA True 569 mRNA 0.43 2 1071463 1072428

Neighbor

gene id symbol gene type direction distance location
CI01000098_00996891_01000102 NA coding upstream 71188 996891 ~ 1000275 (+)
CI01000098_00987638_00993102 NA coding upstream 78361 987638 ~ 993102 (+)
CI01000098_00899135_00921462 NA coding upstream 149739 899077 ~ 921724 (+)
CI01000098_00894309_00897316 NA coding upstream 174076 894309 ~ 897387 (+)
CI01000098_00791105_00826150 MOV10L1 coding upstream 245299 791105 ~ 826164 (+)
CI01000098_01084929_01096605 IRF4A, IRF4 coding downstream 12501 1084929 ~ 1097920 (+)
CI01000098_01176785_01212612 NA coding downstream 104259 1176687 ~ 1213367 (+)
CI01000098_01220800_01221705 FOXQ1 coding downstream 147738 1220166 ~ 1222166 (+)
CI01000098_01226066_01228884 FOXF2, FOXF2A coding downstream 153076 1225504 ~ 1229008 (+)
CI01000098_01280234_01281476 NA coding downstream 207806 1280234 ~ 1281916 (+)
G313430 NA non-coding upstream 59435 1010317 ~ 1012028 (+)
G313438 NA non-coding upstream 90670 979392 ~ 980793 (+)
G313447 NA non-coding upstream 109952 961278 ~ 961511 (+)
G313457 NA non-coding upstream 112395 958827 ~ 959068 (+)
G313456 NA non-coding upstream 112675 958532 ~ 958788 (+)
G313473 NA non-coding downstream 63525 1135953 ~ 1510130 (+)
G313504 NA non-coding downstream 189214 1261642 ~ 1268236 (+)
G313543 NA non-coding downstream 247518 1319946 ~ 1367497 (+)
G314032 NA non-coding downstream 455713 1528141 ~ 1528525 (+)
G314036 NA non-coding downstream 467848 1540276 ~ 1540483 (+)
G313412 NA other upstream 205516 864629 ~ 865947 (+)
CI01000098_00274963_00275658 NA other upstream 796206 274731 ~ 275712 (+)
G314121 NA other downstream 682712 1755140 ~ 1760972 (+)
G314278 NA other downstream 1156896 2229324 ~ 2234831 (+)
CI01000098_02167217_02267829 NA other downstream 1175688 2167217 ~ 2267829 (+)
G314652 NA other downstream 2129092 3201520 ~ 3204360 (+)

Expression


Co-expression Network