CI01000098_01280234_01281476


Basic Information

Item Value
gene id CI01000098_01280234_01281476
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000098
NCBI id null
chromosome length 3223972
location 1280234 ~ 1281916 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000098_01280234_01281476.mRNA
ATGGAAACCACATCAGATGCCAAAAACCACAAGAGCCCTGATATGGATTTGAGCCAACCAACTTGTAGAATACTCACTCCTGATGAAAGCCAGAAACTGGAAGTCAGAAGTGCGAGAGAAATTCTGCTCAGGCCCAAAATCAAGATCAGCCTTGGAACATGGAATGTCCGCACCATGTTTAAGACATCAAATGCCGCTCAAGTCCTTAGTGAGATGGCTAGATACCAGCTGGACATCCTTGGTATAAGTGAATGCCTTTGGACTGGAGCTGGCAAACAGGTGATAAGTGGTGGATCAGTGATACTATACTCAGGGCACACAGAACGTCACGAAAACAGCATAGCCATCATAGTCTCCAAAGAGAAGGCCAAGATGGGATCCTCTCTCACCATCCTACAGTGCTATGCACCAACAAATGAAGCTGAGTATGAGGCCAGAGACAGCTGGTATGAAGAACTACAAACAGCTGTCTCCAAAGTCCCTCAACATGACATGTTGTTGATCATAGAAGACATAAATCCTAAGATGCAGGCAGTATGTGATAGGAAGGGCAAGTTCCTTAATGTTTTTGTGGGATATCCAGGTTCTGTCCACGACACTAGAGTCCTGAGAAACAGCAAGATCGCATTGTATCCTCCACAAGGATACTTCCTTGTGGGGGATGGAGGCTACCCCTGCATCATCCATCCTGTGGCCATCATTACTCCAGGAGCCAGTCCAAGGGAGAGTGTAGGTCCGCTTCAATCACCACCATGCCAAGGCTCGCTCCATAATTGAGCAGGTCTTTGGTATGATGAAAACACGCTGGATGTGACTGCTTTTCAATTCTCTTGAGGTGGACCACATCTTTGCCCCAACAGTTATTGTGTCGTGTGCAGTCCTGCTTAACATTTGCCTGACAACAGGAGACATAATTGAAGCCACTAAAATTGTGGATGATGTCGGATTACTTCCACCCTATCTGTAGTGGTAATGCCTAGCATGATAGACTGGCAGCAAAACTCTCAGCTCCTCAGGTGTATCCAGTGAAGTTAAATGAGCATGATAAATTTGTAGATACATAAAGATAAATGTTGCTCCACACAATGTTTATGTTCAGATTGTGTTCAGATAATCTATTTATGTATGGATTAAAATGTTTCCCCCATGTCTCTAGCCTCATGCATTAAATTATTTGCAATACCCACATTATCAATAGATATAATAGTTTAATGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000098_01280234_01281476.mRNA True 1217 mRNA 0.44 2 1280234 1281916

Neighbor

gene id symbol gene type direction distance location
CI01000098_01226066_01228884 FOXF2, FOXF2A coding upstream 51226 1225504 ~ 1229008 (+)
CI01000098_01220800_01221705 FOXQ1 coding upstream 58068 1220166 ~ 1222166 (+)
CI01000098_01176785_01212612 NA coding upstream 66867 1176687 ~ 1213367 (+)
CI01000098_01084929_01096605 IRF4A, IRF4 coding upstream 182314 1084929 ~ 1097920 (+)
CI01000098_01071463_01072189 NA coding upstream 207806 1071463 ~ 1072428 (+)
CI01000098_01294815_01296281 FOXC1.S, FOXC1, FOXC1A coding downstream 11152 1293068 ~ 1296756 (+)
CI01000098_01491396_01493506 NA coding downstream 209198 1491114 ~ 1493824 (+)
CI01000098_01617418_01644911 WRNIP1 coding downstream 335139 1617055 ~ 1645859 (+)
CI01000098_01732302_01733453 NA coding downstream 450342 1732258 ~ 1733530 (+)
CI01000098_01788449_01870321 CACNA1E coding downstream 506426 1788342 ~ 1870814 (+)
G313504 NA non-coding upstream 11998 1261642 ~ 1268236 (+)
G313430 NA non-coding upstream 268206 1010317 ~ 1012028 (+)
G313438 NA non-coding upstream 299441 979392 ~ 980793 (+)
G313447 NA non-coding upstream 318723 961278 ~ 961511 (+)
G313457 NA non-coding upstream 321166 958827 ~ 959068 (+)
G313543 NA non-coding downstream 38030 1319946 ~ 1367497 (+)
G314032 NA non-coding downstream 246225 1528141 ~ 1528525 (+)
G314036 NA non-coding downstream 258360 1540276 ~ 1540483 (+)
G314055 NA non-coding downstream 300193 1582109 ~ 1591005 (+)
G314070 NA non-coding downstream 367023 1648939 ~ 1649161 (+)
G313412 NA other upstream 414287 864629 ~ 865947 (+)
CI01000098_00274963_00275658 NA other upstream 1004977 274731 ~ 275712 (+)
G314121 NA other downstream 473224 1755140 ~ 1760972 (+)
G314278 NA other downstream 947408 2229324 ~ 2234831 (+)
CI01000098_02167217_02267829 NA other downstream 966200 2167217 ~ 2267829 (+)
G314652 NA other downstream 1919604 3201520 ~ 3204360 (+)

Expression


Co-expression Network