G314761


Basic Information

Item Value
gene id G314761
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000098
NCBI id null
chromosome length 3223972
location 1825119 ~ 1849609 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU357896
GTGCTTCAGGACAAGGTCGTAGGCAGCTGGCGCCGAATGGTACTTCATCATGAGAACTACTGTGTTGAGTGCAATCATGACTAGAACTGTGTACTCGAATGATGGCGACACCACAAAGTGCCACAATCGGTACTGGAGGGTCTGCCTGTTCTGAGGCATGTATCTTGTAAGGGGTTTTGCACTGATAGTAAAGTCAATGCATGCCCGCTCGTTTTTCTCCAAGTTGCACTCCTCCATCATTTTGTCACCCTGCTCCTGGAATGTGATGATGATGAGAGCAACAAAGATGTTGACAAAAAAGAAGGGAAAAACCACAAAGTATACGACATAGAAAATGGACATCTCCATTCGGTTTCCTCTGCTTGGGCCATGGTCTTCTTCAGTGACATCCACGGAGTGTTGAAGAACTTGTGGCCAGCCCTCTCCTGTGGACACAGTAAAGAGTGTAAGAAGAGCCCAGAGGACATTATCATAGTGGAACTCGTGTCTCCTCCACTCCCTCTTCTTCACCTCCTTCCTGTCCCTGCCATAGTCAATGTAGTAGCCCTGGCATTCTTTTTGGGTTCCCATTGAGCCATCAGTACAGTAAAAAAACTTTCCCTTAAAGAGCTGCACTGCAATGACAGCAAAGATGAACATGAAGAGCTTGTAGACGATGAGAATGTTGAAGACGTTCTTCAGGGATGTGACCACACAATCGAACACAGCCTTGAGCTTTGGAAGTCTTTTGATGGTCTTGAGAGGGCGAAGAACTCTGAGAACCCGCAAGGACTTAATGGTCTTTATGTCTCTGCCTTTGTTGTTTGTCAATGCAAAGGCAATTAGAGCTCCAACCACCACAATAAAGTCTAGAATGTTCCACAAGTCCCGGAAATATGATCCATCATGAAGAATGAGGCCCTGGTCAATCATCTTTATAATCATCTCAAATGTGAAAACGCCAGTGAAAACATAATCAAAGTAACGGAGAACTCTATTCCTCTCTGAACTGGCGCACACAGGGTCCTCAGCAGCTAGTGCAATACTGCTGGCCACAATCACCAGGAGAATGGTCATCTCAAAGTACCTCAGGGTCACCACATAGTGGCAGATCCTTCTTATAGGATTTGTGCTTTTGAAAATGAACATGCTGTCTGGTGTGTCAGGTTTGGGGACAGTTGACTGTTCACCTCCATTCTCATCATCATAATCATCGTCGTCATCAGCTTTGTCCGAGTGACTGGCCTCCACGTCCTTAAAACTGACAGTCATTGGTGCCATTTCCAACAAAGGCTGGGCTGACGTCTCTCGTTTAATGCTGGTTTCTGTTATACACTCATCCTGGTTAAGATAGCTGCCGTTGTTCTCAATGTCTGAGACTTCCCCTGTGATGTATTTGGATTCTGATGTAAAGTCTTCTTTGTGCCTCAGAAATGGAGTTTCCTGGCTTTCTGCTTGATCCTCCATTCCAGTACAGACAGACTGAAGCTCCTCAAGAACAGCTGCTTGTCCTGTCACATCACCCACAAACTCCCTTTGGCATTCCTCCTGTTTCTCAATTTGCTTGCCAGACATTATTTCAGTTTCATACATGTGCATCATGTTTTTAGACTGTGTTTCCTCCATTTTATCCTCACCCTCTTCAGCCTGTTTCTCGCTGCACCCAAATTGCTGGTGATTCTCTACATTTCTGCTCTCTGTTCTGGACTCTCGATGTCTGTGCCGTTTGTGTCGCCCACCCTCTGCTACCCCTGCAGCGGCAGCAGCCCGAAACTTTCTTGCCACACGATGCCTCCTCTCTGTATTTGAATGGTGGTTATTAACGCTTGGCCTCTCCTCCAGCCCCGATCCCATCAGGGGCAATGGCTCAGACTCTGGAGGTTCAGGGAGAGGAATGGTGATAGACATGGGTGGCTCTGGCAGGGGAATCCCCACAGACATTGGTGATTCTGGCAAGTGTAAAGGGCTTGTCTCAGGGGACATGCAGCTCTGTTGGTGATGATCACTCACTGGAGTGTCCATCTGATCCTCTGTAGGACTGCCAAACAGTACCTCACGACTGGCCATCTGGCGACGTTTCCGCAGCTGGTTCGTCCTTTGCTCCCAGACGGACATGTTAATTTTTTTACGTCTCTCACGTCGGCCAGCAAAAGCATTCACAGGCTGCTCTTCCCCTTGTTTGACAGCAGGTTCCTCTTCTGCCTCTGCAGGAGATGGTCTTCCTCGGTGGATGGCGCGCTTCCTGTACAAGTATGGT
>TU357897
GCTGTAAGCAGTAGATTAATCACAACAGACTGAGCCATCTGACCAATCAGAGCAGAGTAGTCTCGAAGAAAGGAGGGGTTTTGAGAGACAAACCATTTTCAGACTTTTTGAGAAATTAAGTGTTGTGCAATGTATATTATGAGAAGATTAAAGTGTTTTTGACCTTGAATGAATATAAGCCTATTGTAGGAGACCTGAAAAACAAAATTAGGAACCTTTAAAATAGCATAGGGGCACTTTAAAGTCAAATTACTCAGTCATTACATTATTCATTATATGAATCCTTAAAAATTCAATGATGAAATACAATAGTTTACTCTATTCCTCTCTGAACTGGCGCACACAGGGTCCTCAGCAGCTAGTGCAATACTGCTGGCCACAATCACCAGGAGAATGGTCATCTCAAAGTACCTCAGGGTCACCACATAGTGGCAGATCCTTCTTATAGGATTTGTGCTTTTGAAAATGAACATGCTGTCTGGTGTGTCAGGTTTGGGGACAGTTGACTGTTCACCTCCATTCTCATCATCATAATCATCGTCGTCATCAGCTTTGTCCGAGTGACTGGCCTCCACGTCCTTAAAACTGACAGTCATTGGTGCCATTTCCAACAAAGGCTGGGCTGACGTCTCTCGTTTAATGCTGGTTTCTGTTATACACTCATCCTGGTTAAGATAGCTGCCGTTGTTCTCAATGTCTGAGACTTCCCCTGTGATGTATTTGGATTCTGATGTAAAGTCTTCTTTGTGCCTCAGAAATGGAGTTTCCTGGCTTTCTGCTTGATCCTCCATTCCAGTACAGACAGACTGAAGCTCCTCAAGAACAGCTGCTTGTCCTGTCACATCACCCACAAACTCCCTTTGGCATTCCTCCTGTTTCTCAATTTGCTTGCCAGACATTATTTCAGTTTCATACATGTGCATCATGTTTTTAGACTGTGTTTCCTCCATTTTATCCTCACCCTCTTCAGCCTGTTTCTCGCTGCACCCAAATTGCTGGTGATTCTCTACATTTCTGCTCTCTGTTCTGGACTCTCGATGTCTGTGCCGTTTGTGTCGCCCACCCTCTGCTACCCCTGCAGCGGCAGCAGCCCGAAACTTTCTTGCCACACGATGCCTCCTCTCTGTATTTGAATGGTGGTTATTAACGCTTGGCCTCTCCTCCAGCCCCGATCCCATCAGGGGCAATGGCTCAGACTCTGGAGGTTCAGGGAGAGGAATGGTGATAGACATGGGTGGCTCTGGCAGGGGAATCCCCACAGACATTGGTGATTCTGGCAAGTGTAAAGGGCTTGTCTCAGGGGACATGCAGCTCTGTTGGTGATGATCACTCACTGGAGTGTCCATCTGATCCTCTGTAGGACTGCCAAACAGTACCTCACGACTGGCCATCTGGCGACGTTTCCGCAGCTGGTTCGTCCTTTGCTCCCAGACGGACATGTTAATTTTTTTACGTCTCTCACGTCGGCCAGCAAAAGCATTCACAGGCTGCTCTTCCCCTTGTTTGACAGCAGGTTCCTCTTCTGCCTCTGCAGGAGATGGTCTTCCTCGGTGGATGGCGCGCTTCCTGTACAAGTATGGT
>TU357900
TGAATAAAAGGCAGAATATAGAGGGATGGAAAGCATGATCTGAACAGTGTAAAAAGAGCAGATACCTTGAGCTTTGGAAGTCTTTTGATGGTCTTGAGAGGGCGAAGAACTCTGAGAACCCGCAAGGACTTAATGGTCTTTATGTCTCTGCCTTTGTTGTTTCCCATTAAATTCCTGGAAGCCACAGAGATACAATCCAAAACAATAACAGAAGCATAAAAAGAGAAAGAACATATGAACATCTCAAGTGTGTGTAAAGTCATTAAATAATCAAGTGGCTGAGCTGAACCAGAGCATATGTAAGAAAGTCTGGAATATCCTTTTATAAAAATACTTTCTTAAATAACAACACAAATATGCTCTTTTTTTTTTTTTTTTTAGATAAAATGACCAGGATAACATGTTATGACCCTTAACATTTGTGTAAATTGTGAGTTATCTGCTTATACATTTTTTTGTACATATGTCTAATGCTAGGCAGTGATTTTATGGTTTCTCTCAATTGTTTCCCAAATAGACTCTAAAAATTAGGACACCATCATTCAACTTAAATATATATTATCTAAAATAGCTTAAGATCATATTTTACATATATTCTTCAAAATGGCTAGCATAAATCAGAAAGTAACTATATATGTGTGGCTTTCATCTCTGTTTGTATGTATATCATTACAGAATATATTAGCAAACATCAAGCATAAAAGAGTAATAACCAACCACTGTGGACACAAGAATTATATAACTTAAATGAGGGGTGTCCAAAGTACAGCCCACGGGCCCATAGCCTGCTCTGAATCAGCCTGCAAGATGCTTTAAAAATAGAACAGGATTTGGCCTGCTATTAAGAAAGCATATGAAATTTATAGGTTGCATTTGAATATTGATATCACATTTAGCCAAATCTCACAACACACCACCTCCACTAGTGCAGTTACCACCAGCTTCTTTTACAGTCCGAGGTCCTCTGATGAAGTTCCACACAAAAAGAATGAAGAGATTGTTTGGCTTGTCGTACATATACTCTTTTTGCATACTATACTCTACAATTAGCACAGAGCATTTGGTATTAAATGCTGACTATACCTGTTTAGCCTGCATACTCTACAAAAGTTAGTATGTGTGATCCTCTGGACTCCAACCTTCCCAATCTATTGAATAATACATACGCCCACAGGCCAGTCATTACATACTATCCTCGGTCTAGTACTGTCAATAAGAGCCTAAATGTGTGGTCACATTTCACTTTGTTTTAAATTTTCATGTGGAGAATGCTGTAATTTCAATAGGAACCCACACAACTGGGAATTTGGGGTGAGAGTAAAAGATTTTGCATGCAATGGATTCAAGCTGGTCACGTACATTTTCTAATTTGACCAACAGAAAGCTGCTTGATTTAATAAATCGCTACACTATTAACAATAGAAAATTAACCTTTTTTTGCTAATGTGACCACACTGTAAAATAAAGACTTTGTTGCTAATATTGATGGTTGACTAGAGTGGTCTCATCTTTTTCCAATTTCCAAGTTTTCTAAAAAAAAAAAAAAAAAAAAAAAATCTCTGTTCCTATGGTTGACTTCTAGCCAGGAAAATAATGCTCTGGTTATCCACTGAGACCTGAGAATAAAACTACTAATTAACTACATTCAACTCACAATTAATATCCAATTATAGAAATTAACCTACTTACTACTATTTTTTTTTTTTCATACTACCCAGAGGACTACTAAGAACTAATACAGGTTCATAATTAATGAGAGTAATGTTCAATGTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU357896 False 2236 lncRNA 0.48 12 1825119 1849609
TU357897 False 1581 lncRNA 0.46 4 1825119 1836766
TU357900 True 1775 lncRNA 0.34 2 1840107 1842895

Neighbor

gene id symbol gene type direction distance location
CI01000098_01749704_01753851 NA coding downstream 70101 1749522 ~ 1755018 (-)
CI01000098_01664581_01680008 NA coding downstream 144656 1664315 ~ 1680463 (-)
CI01000098_01584303_01593461 MYLK4 coding downstream 231658 1584263 ~ 1593461 (-)
CI01000098_01484397_01487146 NA coding downstream 337716 1484108 ~ 1487403 (-)
CI01000098_01457139_01462058 NA coding downstream 362800 1457132 ~ 1462319 (-)
CI01000098_01921142_01930710 NA coding upstream 71451 1921060 ~ 1930710 (-)
CI01000098_01954977_01956154 NA coding upstream 105135 1954744 ~ 1957084 (-)
CI01000098_02023150_02033196 ZNF521, ZNF423, ZNF521.S coding upstream 173266 2022875 ~ 2034879 (-)
CI01000098_02053731_02059911 ZNF521 coding upstream 203793 2053402 ~ 2059911 (-)
CI01000098_02092266_02097691 NA coding upstream 242510 2092119 ~ 2097691 (-)
G314725 NA non-coding downstream 87092 1730726 ~ 1738027 (-)
G314724 NA non-coding downstream 94087 1725389 ~ 1731032 (-)
G314723 NA non-coding downstream 99859 1725027 ~ 1725260 (-)
G314722 NA non-coding downstream 100247 1724662 ~ 1724872 (-)
G314778 NA non-coding upstream 1029 1850638 ~ 1871167 (-)
G314792 NA non-coding upstream 25992 1875601 ~ 1882679 (-)
G314795 NA non-coding upstream 33506 1883115 ~ 1883324 (-)
G314806 NA non-coding upstream 56652 1906261 ~ 1906474 (-)
G314807 NA non-coding upstream 58966 1908575 ~ 1909070 (-)
CI01000098_00525874_00530211 NA other downstream 1296564 525701 ~ 530266 (-)
G314830 NA other upstream 213729 2063338 ~ 2100817 (-)

Expression


Co-expression Network