XLOC_011075 (CU855821.1)


Basic Information

Item Value
gene id XLOC_011075
gene name CU855821.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 50917913 ~ 50918908 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021601
ATGGTGTGGACACAGCATCTCAGTAACCTGGTGTTGGGTGTGTACGGCTTCACGCTGGTCACAGGCTTTCCCGCAAACATCTTGGCTTTCTACACGTTCTTCCAGAAGGTTCGGCAGCGCTCCACCCCGATGGACGTGCTGCTACTCAGTTTGACCATCTCTGACCTGGTCTTCCTCTTCTTCCTGCCCTTCCGCATGGTGGAGGCGGCCAACATGAAGTGGACACTGCCATATTTCCTCTGCCCGCTGTCGGGTTTCATCTTCTACTCCATCATCTGCAACAGCGTCCTCCATCTGACGGCCATCAGTGTTGAGCGATACCTCGGTGTGGCCTTTCCTATTAAATACAAACTCAAACGCAACCCCAGGAATGCATTGATCGCCACGGTCATATTCTGGTTTGTGTCAATGGCGCACTGCAGTGTTGTTTATATCACGCAGTACCTCAATTATTTCAACCCCAACATCACTGATCCGTCCAAGCGTAACACATGCTATGAAGAATTCAGCTCTGAACAGCTGAAGATCCTAGTTCCGGTTCGACTAGAGCTTTCCTTTGTGTTCTTCCTGTTTCCTTTCATCATCTGCTGCTTCTGCTACATCAAGTGCATCCTTATACTGTCCCGTTTGTCCAACGTTAATGCTAAGAAGCGTTTTAGAGCTATCGGGATGGCGTTGGGAACCCTTTTGGTCTTTGCTATCTGTTTCATGCCCTTCAACATCTCCCACGTGGACGGTTTTCTAAAAAACCGCAGCTCTGAATGGAGAACAGAGGCTCTCCTCAGCAGCACGCTCAATGCATGCCTCGATCCTTTCGTCTTCTACTTCTCGTCTTCGGCGCTCAGAGAGACTTTCAAGAACATCCTGCGGGCACTGGGGAAAACTGTGGGGAGAAATGATGAGAAAACGCAGAGCACTGATGACAGCATCCGCTAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000079661

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021601 True 936 mRNA 0.50 2 50917913 50918908

Neighbor

gene id symbol gene type direction distance location
XLOC_011074 si:ch73-90p23.1 coding downstream 20026 50889118 ~ 50897887 (-)
XLOC_011073 LO018246.1 coding downstream 279127 50638670 ~ 50638786 (-)
XLOC_011072 etfb coding downstream 688639 50214819 ~ 50229274 (-)
XLOC_011071 vsig10l coding downstream 714855 50183190 ~ 50203058 (-)
XLOC_011070 lim2.5 coding downstream 736707 50166421 ~ 50181206 (-)
XLOC_011076 si:dkeyp-97a10.3 coding upstream 7547 50926455 ~ 50952266 (-)
XLOC_011077 FP243388.2 coding upstream 16282 50935190 ~ 50935306 (-)
XLOC_011078 FP243388.1 coding upstream 42338 50961246 ~ 50961362 (-)
XLOC_011079 ago3a coding upstream 83049 51001957 ~ 51072406 (-)
XLOC_011080 NA coding upstream 159759 51078667 ~ 51080430 (-)
XLOC_010626 CR392024.2 misc downstream 30022738 20895112 ~ 20895175 (-)
XLOC_011068 CR855313.1 non-coding downstream 922319 49995478 ~ 49995594 (-)
XLOC_011064 NA non-coding downstream 1680812 49236408 ~ 49237101 (-)
XLOC_011063 NA non-coding downstream 1695820 49215478 ~ 49222093 (-)
XLOC_011062 NA non-coding downstream 1733429 49155860 ~ 49184484 (-)
XLOC_011087 CABZ01074290.1 non-coding upstream 836484 51755392 ~ 51755506 (-)
XLOC_011088 NA non-coding upstream 956463 51875371 ~ 51889734 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000086_01005334_01006342 NA coding CI01000086 null 1004584 ~ 1006342 (-)