CI01000106_00512101_00521608


Basic Information

Item Value
gene id CI01000106_00512101_00521608
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000106
NCBI id null
chromosome length 3151683
location 511891 ~ 521834 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000106_00512101_00521608.mRNA
CCTTTCCGTGCTTGAGGCAGTAAAGTAATAAATCGGCATCTTCTATTTGTTGAAAACTTCCTCATTGAGTGGTAGTAACAAGGGGTTGTGGGCAGTTAATTACAAACAGTTTCAGAAAGTATCTTGCAAAGTGCAACAGGTGGCATTCATCATCTCTAGATCTGAACTAATGGAATTACTTTTGGGAAATAGAGAGAAATGAAGGGCGCAGAAGTGGATTGCACACATGGAGGAACAATGCTGTGCTCATCAGTTCATGGGTTTGCTGCAGCCTGGAAAGCTGAACATATGGATGAGCCATATATTCATTTCCCTAGCTCAGAGTGAAAACCCCAGGTTGCTGCCCCCCTTTTTAGGAACTTTTGCCCTTATGAAAGTTAGAAGGACTAGTGAGATCGAAGAATCGCCAGACACCGCTGATCATTTGAACCGAGTGACCTCAAAGCATGAGATTCAGGCAGATGATGTGTTCAATAGCGCTACAAATGATCTAGCCGAGTATCAGATAATGTGGGAGCTGATGGCTGCTGCCGGGGAGAGAGCGGTGCATTTCATTACGACTGCGCCGCCATCAGATGCTGATTCACTGTCAGGAAATGGTGGAGAGCGTGCCAAAAGTCACACAGATGTTGCATTGTACTCATCTTTTCAAAATGAAGCCAACAAGCAGGCGGCAAGAGAATATGTCCATGGATTGAGGACAAACAGTGTTGATTTTAGGAGTTTCTCAGCTGTGCCATTAAGGACGAAGGAATTGTAAACATATTTAAGGCGGTATTCACATCGTCTGATCTGTTACATCTGGAACGTGTCATGCAGATGCATCCTCTGAGGATACGGGGAATAGAGGGTTCCTAAATGAATACAGCATTCCAGAAAGATTACTTTATGAAGTAGCATTGAAGATTTTTTTTTTTTTTTTTTTAATTATTAAACAGATTTTGATAGATTGGCTACACACAATATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000106_00512101_00521608.mRNA True 970 mRNA 0.42 3 511891 521834

Neighbor

gene id symbol gene type direction distance location
CI01000106_00404235_00474818 NA coding downstream 37073 404235 ~ 474818 (-)
CI01000106_00301563_00318741 NRXN3A coding downstream 192624 301464 ~ 319267 (-)
CI01000106_00249711_00261211 NRXN3, NRXN1 coding downstream 250284 249531 ~ 261607 (-)
CI01000106_00012994_00243714 NRXN3A, NRXN3 coding downstream 268177 12994 ~ 243714 (-)
CI01000106_00524817_00538057 SLIRP coding upstream 2402 524236 ~ 538283 (-)
CI01000106_00622921_00625105 NA coding upstream 101074 622129 ~ 625646 (-)
CI01000106_00671555_00680014 HHIPL1 coding upstream 148553 670387 ~ 680014 (-)
CI01000106_00830601_00831355 NA coding upstream 307862 829696 ~ 831404 (-)
CI01000106_00972070_00983066 NA coding upstream 450218 972052 ~ 984513 (-)
G318589 NA non-coding downstream 130655 378027 ~ 381236 (-)
G318557 NA non-coding downstream 272305 238999 ~ 239586 (-)
G318538 NA non-coding downstream 320747 132837 ~ 191144 (-)
G318545 NA non-coding downstream 383151 114838 ~ 128740 (-)
G318542 NA non-coding downstream 400431 106084 ~ 111460 (-)
G318610 NA non-coding upstream 24770 546604 ~ 546892 (-)
G318611 NA non-coding upstream 25448 547282 ~ 547548 (-)
G318612 NA non-coding upstream 25755 547589 ~ 547798 (-)
G318614 NA non-coding upstream 32619 554453 ~ 554748 (-)
G318618 NA non-coding upstream 37764 559598 ~ 559823 (-)
G319941 NA other upstream 2170090 2691924 ~ 2692406 (-)

Expression


Co-expression Network