CI01000106_00972070_00983066


Basic Information

Item Value
gene id CI01000106_00972070_00983066
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000106
NCBI id null
chromosome length 3151683
location 972052 ~ 984513 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000106_00972070_00983066.mRNA
AGCTCCTTTCCTTTTTATCTATGGGCCAAAATCTGAATAATTGAAAAGAGACACATCTTGTGTAAGTGTCTGGAATTTTAAACATTAATAGCACTGCATTCCCTGGACAGCTCCAGCTACATTGAAACCACTAAATGATATACAGTCATAGGAGTTCTGCCATTTAGAGCACAAGAAAGCACTTCCCAAATTATTAAAATCACGGGAATATATGTCATTGACCACATTCATCTATGCAAAAAGACCTCTGTGGATGAAAGAGTGATTACACAACACATTACAGATCTGCACAGGCGTCAGGCATATATTTTTTGTCACCAGTGGCAGTCATGGTACTCGAAGTGAGAGGAACACAAACACAGTTTGATTATTTAGTAGTTTTTCACAAAAATGTGATAGTTTAGTGATACATATTCATAAAGTCACTTATCCTCACCCAGGCTGCATTTATTTGATCAAAAATATAGTAAAAACAGTAATATTGTGAAATATTATTACAAATTAAAAAGAACAGCCATTACTTCAGTCTTCAGTGTCACATGACATTATACATACAGTCAAACCAAAAATTATTCAGACATTTTTGATATATTTTTACTAGTGGGTGCAGGACACTATAGTTCATATATGTAAGTGAGGATAGCAAAATAAAGTAAACTGTGACATATTATACCCAAAAATTCTTCATACAGTGGACTACGAGCAAAATTGATAAAAATTTGGAACCAAAAATTATTCAGACACTTTGACCTGACCATGTTTTGATTAAGTGTTATCTGACATAATTAAGATTATTTTTTTTAACTCTGAGATCTTGTCAATTTTGGTTTGACTGTATATAAAAACTCTACTGTTCAATTTTTTATTATATATGTGTACACTAATTTGTTTTAAACAAAAGTGTGTAAAAAGTATAAATTTTCTTTTCACTTTGAAAGGACATTTCTGGATTAGTAAATATTTTTAACCCTACATGTCAATGTTAAAATAAAGTGGAGAATGAAGCAAGAACAGAGTTGGCTAGGAATTCCCTCCAGCTGTTCTCTGGGCATCCTTTAACCTGCAGGGTTTTTATTGATCGGTTTTTACAGATCGACTGTCAAATGTTCATTTAGATTATCACAAGAAAGCCTGACTCATGTACGACCTCAAGCAAGATATTCATTTTTAAGATCATGTCCTTTGCTGCCATTAAACTGCACTGGCCAGACACAGTCAAAAAATGGGCTGCTTTATTCGAAACATTGCCTTTTATGACAGCTAAGTGGGACATCAATAAAATCTTTTTTTTTTTTTTTTTTTTTTTTCAAAAACTATTGCCACTTGTTTTGCTTAACTGCCAGCCTCTTACTGCCATAACGTATGGATCTCTGACATAACAGTTCGTTGTTTTTCCACCTCCCACTCTTATCTTTGTGGCCAGGTCTGTCAGAGAGTTTTATTCAGCATGATCGATATCACACAAGCAGTACTGGTGTTTAACGTCCTTCTGGTGGTTTTAAGCAGGTGTAGTTGTGTTAAATGGCTTGCTGAAAGGGTTGTTGGGTTGTGGCTAATTGCTCAAGAACGTGGTATTGGTGCTTTGCATAATGTGTTTACCGGTGGTCTAAAACAGGAGGCAATAATGCAGTGCTTTCTGCAAGCTTATCATTTGTGGTTTTGTGGCCAAAGGCACATTCAGCCACCAAGAGCATCATGGTCAGAGGAGGTGATGTGTCAAGCTACCCTTGAGTCCTTGGCACTTGGCCAGAAGAAACGTTCTGCTAACAAATTTCTTCTTGTGGTCACAGGCATAAGCTATGAGGGTGTGAGGAGAGCTGTAGATTGTTTGTCCTAGTGTCTGCTTTAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000106_00972070_00983066.mRNA True 1855 mRNA 0.36 3 972052 984513

Neighbor

gene id symbol gene type direction distance location
CI01000106_00830601_00831355 NA coding downstream 140648 829696 ~ 831404 (-)
CI01000106_00671555_00680014 HHIPL1 coding downstream 292038 670387 ~ 680014 (-)
CI01000106_00622921_00625105 NA coding downstream 346406 622129 ~ 625646 (-)
CI01000106_00524817_00538057 SLIRP coding downstream 433958 524236 ~ 538283 (-)
CI01000106_00512101_00521608 NA coding downstream 450218 511891 ~ 521834 (-)
CI01000106_00987482_00991346 NA coding upstream 2532 987045 ~ 991658 (-)
CI01000106_01140169_01140394 NA coding upstream 154854 1139367 ~ 1141898 (-)
CI01000106_01177461_01184868 NA coding upstream 192919 1177432 ~ 1185072 (-)
CI01000106_01259364_01269803 VRK1 coding upstream 274712 1259225 ~ 1269803 (-)
CI01000106_01336500_01348232 AK7B coding upstream 351821 1336334 ~ 1348232 (-)
G318812 NA non-coding downstream 4908 966795 ~ 967144 (-)
G318811 NA non-coding downstream 6255 965475 ~ 965797 (-)
G318810 NA non-coding downstream 24354 947217 ~ 947698 (-)
G318809 NA non-coding downstream 32336 939346 ~ 939716 (-)
G318805 NA non-coding downstream 47247 924534 ~ 924805 (-)
G318818 NA non-coding upstream 5305 989818 ~ 990048 (-)
G318822 NA non-coding upstream 16937 1001450 ~ 1001670 (-)
G318823 NA non-coding upstream 25346 1009859 ~ 1010074 (-)
G318832 NA non-coding upstream 45733 1030246 ~ 1030466 (-)
G318833 NA non-coding upstream 46668 1031181 ~ 1031462 (-)
G318540 NA other downstream 436499 535495 ~ 535553 (-)
CI01000106_00012994_00243714 NRXN3A, NRXN3 other downstream 866368 12994 ~ 243714 (-)
G319941 NA other upstream 1707411 2691924 ~ 2692406 (-)

Expression


Co-expression Network