CI01000106_01177461_01184868


Basic Information

Item Value
gene id CI01000106_01177461_01184868
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000106
NCBI id null
chromosome length 3151683
location 1177432 ~ 1185072 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000106_01177461_01184868.mRNA
AGTGGCATCCTGCAATCTATGGCATGTTTTAGTGGGGATGGGAAAGGGATGGAAGTGGGGGTGAGGTTGGTCCCAAGAGAGGCACCACTTCCCCTTGTTTATGGGGCATCCTAATTGGGACACTGTTGTCAGACAGTCTGATGTGACTTCTAAGGCGCTGTTTCCCTGAGAAGTGTGCGTTTGTGTGCTTGCTTATGTGCACACATGGTGTTCAAACTCTGCTGCCTGCCCTGTGGCTTCCTCTGCTGTTTCCTGCCTGAGCGGCCCAGGCTGCCTGGGCTGGCTCCCCCTCCGAACGCATCTCCGACGCCGCATGAACGTGGAGGTGCGCCCACCTGTGCTCAGCCCGGCATAAACCCGCAGGTTCGGAGCGCTGGATGGCAGGAACTTCCCACTGCCACCCCCCTCTTCTTACTCCGCTGCTTCCAGCTGAGGAAGAGTGGCCAACGCACCTCACCAAACCGCACTTACCAAAAGCTTGCACAAAATGAGTCGTTCAAACAGGATGTGTATTTACATTCAATTACAGATAGATGGCGCTCAACGAAATACAGGATGCTTTTCAAAGTGGACAACCAAGCCTTAAAACACTGCGCTAATGGCCACCGATCATTGTCTCACGAAAACCCCAAAGAATCATGCGAATCAAACCCCAGGCTACCGTGTGTCAAAAACCTTCTATTTAAGCACCTGAACCAATATAAACCAGCAGTTTACTTCTCTCTCACACAGATGCTGAGCTCCGGATGTGTCTCTGAGGTTAACCTGACACAAGCGACAGCTCCCCTCCCCGTCTGCCTGCCTCGCGCAGCCCCCTCTCGCTCCTTCATCCGTTTCTGGCGCTTTAAAGGAATCACCTTTCTGTGGCGTTCATTTTCTGCATTTATTCCGTCGATGCGGTGCACCCAGGGCTGTGACTCCACCGAGACTTGTGCTGAGAGGGTGGAGAGACAATAGACGGGGGAAAAAATTGCAGACAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000106_01177461_01184868.mRNA True 986 mRNA 0.53 5 1177432 1185072

Neighbor

gene id symbol gene type direction distance location
CI01000106_01140169_01140394 NA coding downstream 35534 1139367 ~ 1141898 (-)
CI01000106_00987482_00991346 NA coding downstream 185774 987045 ~ 991658 (-)
CI01000106_00972070_00983066 NA coding downstream 192919 972052 ~ 984513 (-)
CI01000106_00830601_00831355 NA coding downstream 346028 829696 ~ 831404 (-)
CI01000106_00671555_00680014 HHIPL1 coding downstream 497418 670387 ~ 680014 (-)
CI01000106_01259364_01269803 VRK1 coding upstream 74153 1259225 ~ 1269803 (-)
CI01000106_01336500_01348232 AK7B coding upstream 151262 1336334 ~ 1348232 (-)
CI01000106_01355347_01366777 GALCB coding upstream 169821 1354893 ~ 1366777 (-)
CI01000106_01444620_01449558 FLRT2 coding upstream 258091 1443163 ~ 1449558 (-)
CI01000106_01557772_01560623 NA coding upstream 372685 1557757 ~ 1560880 (-)
G318917 NA non-coding downstream 6353 1170672 ~ 1171079 (-)
G318916 NA non-coding downstream 8706 1168498 ~ 1168726 (-)
G318868 NA non-coding downstream 73799 1103413 ~ 1103633 (-)
G318864 NA non-coding downstream 79690 1097441 ~ 1097742 (-)
G318857 NA non-coding downstream 86481 1090752 ~ 1090951 (-)
G318931 NA non-coding upstream 3389 1188461 ~ 1188930 (-)
G318932 NA non-coding upstream 4186 1189258 ~ 1189592 (-)
G318933 NA non-coding upstream 4824 1189896 ~ 1190208 (-)
G318934 NA non-coding upstream 5542 1190614 ~ 1190841 (-)
G318936 NA non-coding upstream 6638 1191710 ~ 1192027 (-)
CI01000106_00524817_00538057 SLIRP other downstream 638476 524236 ~ 538283 (-)
G318540 NA other downstream 641879 535495 ~ 535553 (-)
CI01000106_00012994_00243714 NRXN3A, NRXN3 other downstream 1071748 12994 ~ 243714 (-)
G319941 NA other upstream 1506852 2691924 ~ 2692406 (-)

Expression


Co-expression Network