CI01000106_00622921_00625105


Basic Information

Item Value
gene id CI01000106_00622921_00625105
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000106
NCBI id null
chromosome length 3151683
location 622129 ~ 625646 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000106_00622921_00625105.mRNA
AGAGGCCTTGTGTCAAAAACTGTTCATTAATGTCATGTATCCCTCAGTAATCACATTCCATGTGGAGAATTCCTGTTGACACTCAATTACCAGCTGGTACCAAATGTACCAGCAGTACTGTACACATTGATACCAACTCTATTAATGTTATAAATGTAAAAAAAAAAAAAAAAAAATGTGGATTGGATACATATCTGCTCTTTTACAAGCTTCAGATGTTTATAATCAGATCTCAGTGCTGCACAACATGTTTTGTAGGGCCAAGATCTAAAAAATAGTTGTACTCGGCAACATGCAGGCACGTTATTAAATCTATTTCTAATTCAAGCTGGTGTGTGTGTTCTGGTGGTTTTTGTGAAATATTATCTGGTGTTTCTTCATTAAATTCTGAATATAGCTTTCACAGCGTCTACCAGGGCATTCGCTATATACTTTCAAACAGATTATGGTTTACAGTTTCAGTTTAACCTCAATTAGAGCACTGGACATTTGAGAGGTTTCCATGCCCGAGTCATCCAGCACAATGCTAAGAAACAGCAACATGAACTTCAGAGAGGGGCTCAAGAATTTGGCGCCATTTGTGGAACTGGTGTCTGCTTGTGTCGAGGAAAGGAACAGCCCTGTGATTATTGGGCTTATCAATTATAGCACCAAGGCCGCTGAACTCCCACCCGACCCTATGCAATTTCTAAGAGTGTGGCGTATTGGATTCCAGCTGGCTGTTTTGATTAGGAACCCCTTCACCAACAGAAGACAAAGTGTCAAGAAAACTGCCCACCGTAAAGCTTGGCTTCGAATCAGCATGACTTCGTAAAAATAATAATAAA

Function

NR:

description
PREDICTED: isthmin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000106_00622921_00625105.mRNA False 827 mRNA 0.40 2 622908 625646

Neighbor

gene id symbol gene type direction distance location
CI01000106_00524817_00538057 SLIRP coding downstream 84814 524236 ~ 538283 (-)
CI01000106_00512101_00521608 NA coding downstream 101074 511891 ~ 521834 (-)
CI01000106_00404235_00474818 NA coding downstream 148090 404235 ~ 474818 (-)
CI01000106_00301563_00318741 NRXN3A coding downstream 303641 301464 ~ 319267 (-)
CI01000106_00249711_00261211 NRXN3, NRXN1 coding downstream 361301 249531 ~ 261607 (-)
CI01000106_00671555_00680014 HHIPL1 coding upstream 44741 670387 ~ 680014 (-)
CI01000106_00830601_00831355 NA coding upstream 204050 829696 ~ 831404 (-)
CI01000106_00972070_00983066 NA coding upstream 346406 972052 ~ 984513 (-)
CI01000106_00987482_00991346 NA coding upstream 361399 987045 ~ 991658 (-)
CI01000106_01140169_01140394 NA coding upstream 513721 1139367 ~ 1141898 (-)
G318640 NA non-coding downstream 12859 609516 ~ 610049 (-)
G318633 NA non-coding downstream 20557 601613 ~ 602351 (-)
G318622 NA non-coding downstream 50414 572271 ~ 572494 (-)
G318618 NA non-coding downstream 63085 559598 ~ 559823 (-)
G318614 NA non-coding downstream 68160 554453 ~ 554748 (-)
G318651 NA non-coding upstream 26822 652468 ~ 652753 (-)
G318655 NA non-coding upstream 39724 665370 ~ 665641 (-)
G318682 NA non-coding upstream 108131 733777 ~ 734439 (-)
G318720 NA non-coding upstream 160777 786423 ~ 786709 (-)
G318723 NA non-coding upstream 164688 790334 ~ 790591 (-)
G318540 NA other downstream 87355 535495 ~ 535553 (-)
CI01000106_00012994_00243714 NRXN3A, NRXN3 other downstream 517224 12994 ~ 243714 (-)
G319941 NA other upstream 2066278 2691924 ~ 2692406 (-)

Expression


Co-expression Network