G328847


Basic Information

Item Value
gene id G328847
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 1930645 ~ 1932170 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU373777
ATGACCAGCACCTGTAGATGCTTGCTGAACAGGAGTCTGCATTTTCCTCCATAATGAGAAACAACTTGTTTCTAAGCCGGTAATAAACGCTCTTATCGAACTCTAAACACCGAAGTAACACGAAAAGTGAGTGACAAATCTTTAGAGATAAACTGTAAATATGGAAAACAATATGTAAATGATGTTTGTGTGGATATTGCATTAAAATATTAATATGAGCAAAGTCGGTCATTTAATTTTAAGATAGCGTGATGATGATAAACTAAAAAAAAAGTATATCAAAAACGATTAAAAACATTAAACACTCACAAAATTCATCACAAGATCCAGGCAGCTACTGTTTACAAATCCAACACACTTTTAACATTTTACAGAAATGACAAAAATTATTTAAAATATATAAAAATGGGCCATCTCAGTAACAGTCATGAAAGATTAATGTAATATCACAAGTGTCATTATTTGTACCATGTATACTATTCAGCAGCAATTCTTAAACTATACACACGTTATGACAGCATAAATATCAGACATGTAGCTAATATATGGCTCAGGGTAATATCAATCCTGTGTTCATCATGCTTGTAGACGTACCTACACTGTTAAATAGTTTGGAAAGATTGTAATGTTTTGGAATACAAGGCACAATGTTAATAAAACACAATTCCAATTAAATATTGTTAAACTTATTAGTGTTGCCTTATTACTAGGTTGCTCTATTTAAATACAGCACAATTCAAACACAAATGTGAGTATATTACATGATATATAGTACAACTGTTTTTCTATCAGTGAGTGCTCTGTGTGTATAGTTGTACACTACTATTTACAGTCGTTATTTGAGTCTCTACCGTAGACATCAGTGTTTATATTTAAACTATAAAACTCTTATCCCATGTACTTCTATGATGATTCAAACTATTATTTCACAGAAATAATGATACCATGAGGTTGAAATAATGAAAGCTGCTCTCTCTGGATCAGCGGCAGCACTAACACAGATTTAAAGGGTTAGTTCACTTAAAAATGAAATCTCTGTCAGTAATTACTCACCCTCATGTCGTTTCACACCCGTAAGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU373777 True 1081 lncRNA 0.32 2 1930645 1932170

Neighbor

gene id symbol gene type direction distance location
CI01000112_01883455_01914770 NA coding upstream 15870 1883244 ~ 1914775 (+)
CI01000112_01865388_01878028 LUC7L3 coding upstream 52457 1865101 ~ 1878188 (+)
CI01000112_01831462_01857713 NA coding upstream 71942 1831462 ~ 1858703 (+)
CI01000112_01753138_01753764 NA coding upstream 176238 1752956 ~ 1754407 (+)
CI01000112_01711753_01717045 NA coding upstream 213531 1711232 ~ 1717114 (+)
CI01000112_02017278_02032299 U2AF2 coding downstream 85108 2017278 ~ 2032413 (+)
CI01000112_02060950_02068272 UNM_SA1261 coding downstream 128551 2060721 ~ 2068604 (+)
CI01000112_02109843_02114079 CDR2A coding downstream 177673 2109843 ~ 2114563 (+)
CI01000112_02207728_02210655 NA coding downstream 275520 2207690 ~ 2210957 (+)
CI01000112_02240184_02240792 C16ORF52 coding downstream 305499 2237669 ~ 2241243 (+)
G328826 NA non-coding upstream 120686 1796096 ~ 1809959 (+)
G328830 NA non-coding upstream 128312 1776109 ~ 1802333 (+)
G328823 NA non-coding upstream 129987 1798515 ~ 1800658 (+)
G328879 NA non-coding upstream 174108 1756188 ~ 1756537 (+)
G328878 NA non-coding upstream 175362 1754952 ~ 1755283 (+)
G328840 NA non-coding downstream 41570 1973740 ~ 1974774 (+)
G328892 NA non-coding downstream 43550 1975720 ~ 1976198 (+)
G328852 NA non-coding downstream 49087 1981257 ~ 1983318 (+)
G328893 NA non-coding downstream 51151 1983321 ~ 1983526 (+)
G328894 NA non-coding downstream 51752 1983922 ~ 1984713 (+)
G328456 NA other upstream 697527 1232022 ~ 1233118 (+)
G329125 NA other downstream 685534 2617704 ~ 2618151 (+)
G329194 NA other downstream 988084 2920254 ~ 2931889 (+)
CI01000112_05076817_05101845 NA other downstream 3152550 5076817 ~ 5101845 (+)

Expression


Co-expression Network