CI01000113_01510550_01513751


Basic Information

Item Value
gene id CI01000113_01510550_01513751
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 1510550 ~ 1514206 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000113_01510550_01513751.mRNA
ATGAATACCTCTGATTTTCAGACGCAGTTAACATCGATAATGGAAATTATGGCGAGAACCGCTGTTGCTGAAATAAGCAAACTTTTTGAGGAAAATTCTTTGTTGCTGCGATTAGAGATTTCACGATGTACAAACGAAAATGAATCTTTAAAAAAGAAATGTCATTTTCTGGAGAGTGAACTTCAATCTGCCCGGAAAACCGCTGGAAAAATGAACGGGACAGAAGCTCCATTCAGCCATCCGGGACTTAGAGACACTGGACATCGTCCCACAATTGACAGTGTCTTTGGTAAGGAATGGTGCATGAACCTGTGGAGACACCAGGAGTCAAATGTTGGTGAGCAGGAGGGCGACACACACCTGGACTCTTCAGTCATCACAGAAGAGCCAGTAAATCTGCTGGATGAAGAACCAGATGTAATTATGATTAAAGAAGAGACGCTGAAGATTGATGATTGCTCTGGGAAAAATAAACCTGAGGCAGACCAAAGTAACAGTCTGAAAGGACCAGCAATGGCCAGTGATGAGAGTTGTGTTGCCCAGAGCTCTGAAGATTTTATCACATACACGGTACCGTCAGATGAGCAAGTCCAGCCGAACGTACCACAACAGCCACAAGCCGAAGAACAAACTCTTGAAGGAACAATCTCGACACATGGAGACTGTACAACAGGATGGAAACATGTTGGGATACTATTGAATAAAGTGAATTAAAAATTGAAAATTGGATGAAAATGCTGATAGTAAAGGTTGTTTGAAACACTGTGAAATGTGTTCTTGTGCAGGGTTGCCAAGTTTTCACAACAAAACCTGCCCAATTGCTACTCAAAACTAGGCCAATCACGTTTCAGGGGGGTCCCCCGTACAAAATCAAGTCCCAGGGGATAAAAATTTGCTTTTTTGGTGGGGTTTCCCTGGTAAAATTTGCATTCCTGGGGCTAAATATCATGTTATTTGGGGTCGCTCGCTACAACCCGCGGCAACAGTGTTATAGTAGCTCAATTTTGCGGACTTGGCAACAATGTTCTTGTGTCCAGTTTTCTGCTACTTTGGAGAAAAAGAGCTATGGATTTGTTATTGCTGTAACTTTTTTAATAACTAGCCATGATAACTTATAACATGATGTTTTTATCTTTTCTAGTCCCTGAAATATTTTACATTTTTCCTGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000113_01510550_01513751.mRNA True 1169 mRNA 0.41 5 1510550 1514206

Neighbor

gene id symbol gene type direction distance location
CI01000113_01507537_01509522 NA coding upstream 1028 1507537 ~ 1509522 (+)
CI01000113_01424978_01425704 NA coding upstream 84715 1424968 ~ 1425835 (+)
CI01000113_01376249_01385209 NA coding upstream 125148 1374067 ~ 1385402 (+)
CI01000113_01329811_01334714 LPAR2A coding upstream 175815 1328883 ~ 1334735 (+)
CI01000113_01321501_01326215 NA coding upstream 184200 1321356 ~ 1326350 (+)
CI01000113_01515238_01529826 NA coding downstream 965 1515171 ~ 1529951 (+)
CI01000113_01530888_01533572 NA coding downstream 16585 1530791 ~ 1533572 (+)
CI01000113_01547153_01553082 NA coding downstream 32530 1546736 ~ 1553786 (+)
CI01000113_01666106_01684663 NA coding downstream 151860 1666066 ~ 1684701 (+)
CI01000113_01691097_01696776 NA coding downstream 176891 1691062 ~ 1696776 (+)
G331709 NA non-coding upstream 19478 1488561 ~ 1491072 (+)
G331611 NA non-coding upstream 110888 1393245 ~ 1399662 (+)
G331702 NA non-coding upstream 120999 1389312 ~ 1389551 (+)
G331692 NA non-coding upstream 142628 1365818 ~ 1367922 (+)
G331661 NA non-coding upstream 231750 1276338 ~ 1278800 (+)
G331732 NA non-coding downstream 29641 1543847 ~ 1544077 (+)
G331735 NA non-coding downstream 41005 1555211 ~ 1555470 (+)
G331737 NA non-coding downstream 53623 1567829 ~ 1568207 (+)
G331744 NA non-coding downstream 71492 1585698 ~ 1586364 (+)
G331746 NA non-coding downstream 87170 1601376 ~ 1601608 (+)
G331615 NA other upstream 263977 1246291 ~ 1246573 (+)
G331487 NA other upstream 588417 917735 ~ 922133 (+)
G331470 NA other upstream 594013 913392 ~ 916537 (+)
G331260 NA other upstream 1175929 334158 ~ 334621 (+)
G331767 NA other downstream 148579 1662785 ~ 1663255 (+)
G331759 NA other downstream 153796 1668002 ~ 1828903 (+)
CI01000113_02342987_02345449 SYCE2 other downstream 829215 2342987 ~ 2346006 (+)
CI01000113_02548934_02576888 TBL3 other downstream 1054561 2548934 ~ 2577790 (+)

Expression


Co-expression Network