CI01000118_00592698_00593631


Basic Information

Item Value
gene id CI01000118_00592698_00593631
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000118
NCBI id null
chromosome length 793180
location 592538 ~ 593805 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000118_00592698_00593631.mRNA
AGTAATGAATATAATTCAAATGGTTTGGTAAGTTGTTTCATTAACCATATTCGGGGTGCATTTCTTGACATGAAGTATGTAAAGTCACAATAAATTTGCATTGGTTTGAATTTGAAAACGTGTGTTTAGTCATCTCTTATTAGAATCCAGCATAGAGGATCTGTGCGAGCAGTCATGGACAGGAGTCTGTTTGTGCTGCTGCTGTCAGGGCTCTTCTGGAGCAGTTCTGCTCTTTCTCGTCAGTACCACTATATAAATGTGAGAATGTCGTGGCCAGAGGCCCAGAGTTACTGCAGAGCGAAGTACACTGACCTGGCTACTGTAGACACCATGGATGATGTGAACAGGCTGGTAAATATAGTGGATTCTGGATATAGTGGATCAGTGTGGATTGGACTGAAGAGAGGGACACAGACACGCTGGGCTTGGTCTAATGGAGAAAACAAATCTTCTCTGTACTCTAACTGGGCTTCAGGAGAGCCAAATGATTATGCATCTTGTGTAACTTATCGTAACGGGTTATGGTATGATATGGCATGTAGCTATGGCCGATATTTTACATGCTACAAGGAAAATAATGGATACGTTCTGGTTCAGAGTGTTAAAAATTGGTATGATGCTCAGAACTACTGCAGACAGTATTACACAGATCTGCCCTCCATCCACAACTCTAAAGACAATAACCAGATAACTAAGGTTCTGTTCTCTGGATATTACATCTGGTTTGGTCTGTTCCAGGACTCTTGGGAATGGTCTGACAAATGGAGCCTCTTCTTTAGAAACTGGGCAGGTCAACCATCCCAGAGTTCAGGATCTGACTGTGTCAGCATGTCAACAACCAATTCTGGGAAATGGGCTCATGAAAGCTGTGATCTACAGCGTCCTTTTATCTGCCATGGATGTAAGCAACTAACAAATTAGATCATGTTAACCAGAAAGACATTTCATGTTCTGTATAGACATCTTGTGCATTATTTAACAGTGAGTGAGTACAAGCACAACAATATGCTGATTACTATAAAAAAAAATTTGCTAAAAACCTGACACTCAAAACAGCCGAAAAATTCAAATTGCCAATAAA

Function

NR:

description
Si:ch211-282j17.1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000118_00592698_00593631.mRNA True 1081 mRNA 0.41 3 592538 593805

Neighbor

gene id symbol gene type direction distance location
CI01000118_00519523_00546014 PER2 coding downstream 45247 519137 ~ 547291 (-)
CI01000118_00505922_00510970 NA coding downstream 81288 505922 ~ 511250 (-)
CI01000118_00445906_00468559 GIGFY2, GIGYF2 coding downstream 123979 445706 ~ 468559 (-)
CI01000118_00433170_00435083 NA coding downstream 156297 432291 ~ 436241 (-)
CI01000118_00396458_00422127 PFKPB, PFKP coding downstream 170411 396317 ~ 422127 (-)
CI01000118_00612526_00613448 NA coding upstream 18567 612372 ~ 613989 (-)
CI01000118_00618667_00629628 NA coding upstream 24687 618492 ~ 629790 (-)
CI01000118_00642239_00643523 NA coding upstream 47080 640885 ~ 643919 (-)
CI01000118_00647533_00651638 NA coding upstream 53083 646888 ~ 652303 (-)
G336345 NA non-coding downstream 26296 566002 ~ 566242 (-)
G336342 NA non-coding downstream 31930 560308 ~ 560608 (-)
G336287 NA non-coding downstream 38041 552859 ~ 554497 (-)
G336340 NA non-coding downstream 76023 516233 ~ 516515 (-)
G336338 NA non-coding downstream 76342 514344 ~ 516196 (-)
G336374 NA non-coding upstream 58696 652501 ~ 653028 (-)
G336375 NA non-coding upstream 59734 653539 ~ 653776 (-)
G336412 NA non-coding upstream 133250 727055 ~ 727378 (-)
G336391 NA non-coding upstream 167511 761316 ~ 767440 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_016846 CR391991.2 coding NC_007113.7 CM002886.2 48447353 ~ 48448225 (-)