CI01000118_00618667_00629628


Basic Information

Item Value
gene id CI01000118_00618667_00629628
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000118
NCBI id null
chromosome length 793180
location 618492 ~ 629790 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000118_00618667_00629628.mRNA
ATTAACCATATTTGGGGTGCATTTCTTGACATGAAGTATGTAAAGTCACAATATATTTGCAATGTATGGTTTGAATTCCCTCCTTACATAACTGTGACACAGAAAATGTGTGTTTGATCATCTCTTATTAGAATCGATCAGAGAGGATCTGTGTGAGCAGTCATGGACGGGAGTCTGTTTGTGCTGCTGCTGCTGTCAGGGCTCTTCTGGAGCAGTTCTGCTCTTTCTCGTCAGTACCACTATATAAATGTGAGAATGTCGTGGCCAGAGGCTCAGAGTTACTGCAGAGCGAAGTACACTGACCTGGCTACTGTAGACACCATGAATGATGTGAACAGGCTGGTAAATATAGTGGATTCTGGATACAGTGGATCAGTGTGGATTGGACTGAAGAGAGGGACACAGACACGCTGGGCTTGGTCTAACGGAGAAAACAAATCTTCTCCGTACTCTAACTGGGCTTCAGGAGAGCCAAATGATTATGCATCTTGTGTAACTTATCGTTATGGGTTCTGGGTTGATATGGAATGTAGCTATAAACGATATTTTACGTGCTACAAGGAAAATAATGGATACATCATGGTATGGAGCGCCAAAACTTGGAGTGATGCTAAGAGCTACTGCAGACAGTATTACACAGATCTGCCCTCCATCCACAGCTCAGAGGATAATAACCAGATAACTAGGGTCATAACATCTGGAAATTACATCTGGTTTGGTCTGTTCCAGGACTCTTGGGAATGGTCTGATAAATGGAGCCGCTTCTTTAGAAACTGGGCAGCAGGTCAACCATCCCAGAGTTCAGGATCTGACTGTGTCGGTATGTCAACAACCGATTCTGGAAAATGGGCTCATGAAAGCTGTGATCTACAGCATCCTTTTATCTGCCATGGAGGGCGCAAGTCTCCTAAGTACCAGCTTATAAATGAAAGCAAGACATGGCAAGATGCTCAGAGTTACTGCAGAGCAAGATTCACGGATCTGGCCACTGCTGACACCATGAGTGACGTGAGTTTGCTGGTAAATACAGTGGATCCTGGATACAGTGGTTCAGTATGGATAGGTCTCCACAATGGAACAGAATATCGCTGGGTCTGGTCTATGGGCACACTGTCCCAGTACAGTATCTGGAATCCAGGAGAACCAAATGGTGATGGGGAGTGTGTGAGGAGTTTTAATGGAAGCTGGTATGATGAGAGCTGCAGCACTGCTCTCCCATTTGTGTGTTTCAATGACAGCTCTGGTTTTATGATCACCGAGACTGCTATGACATGGAGAGATGCTCAGAGTTACTGCAGACAACACCACACTGACTTAGCGAGCATCAGCAGCGCAGAGCAGCAGAATCTGATCAGTAATCAAGCATCGCTGTGGATTGGTCTGTTCCTGGACTCTTGGGAATGGTCTGACAAATGGAGCCTCTTCTTTAGATACTGGGCAGCAGATGACACGTTAATTAAAAAGCAGATCATCAAACTGAAATTGTCCTGTAATGGAAAATGCACATTGAATGATCCTTCATTACAAACTGCCATCCTGAATGAGGGACTGGGGTCCGACTCGCCAACCAGTTCGCTCACAGCAACGCAAACGGATAGACCTGAGTTCTATGTTGCGGCAGGATGGTCCTCTCCGAACACCTTTATCAAGTTCTACAGTCTGGATCTGCTTGAGCGGACTCTTTCTTCTGTCTTTCAGCTATCTTCAGATTTAATGTTTGCAATTTACAGATTGGAACGCATCACTGACGAAGACCTTAAAAAGGCAGAGGAGTTTGCAAAGCTTACACTTCCACTCTATGTAGGCTATATCGAGTGACTCCAACCTATGGCCAAGTCCTTTCTATCCTCCAGAAACTTACAGATTTACAGATTACTGCTTAGTGCTTCAGTATTGTTTACAGATTACTTGTTTTGAATTTATTTATTAAGAATGAGGACATCAGGCACTTCTTGAAGAGGCTACAGCAATGAATATATGCTTCAAAAATAAA

Function

NR:

description
Si:ch211-282j17.1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000118_00618667_00629628.mRNA True 1993 mRNA 0.44 8 618492 629790

Neighbor

gene id symbol gene type direction distance location
CI01000118_00612526_00613448 NA coding downstream 4503 612372 ~ 613989 (-)
CI01000118_00592698_00593631 NA coding downstream 24687 592538 ~ 593805 (-)
CI01000118_00519523_00546014 PER2 coding downstream 71201 519137 ~ 547291 (-)
CI01000118_00505922_00510970 NA coding downstream 107242 505922 ~ 511250 (-)
CI01000118_00445906_00468559 GIGFY2, GIGYF2 coding downstream 149933 445706 ~ 468559 (-)
CI01000118_00642239_00643523 NA coding upstream 11095 640885 ~ 643919 (-)
CI01000118_00647533_00651638 NA coding upstream 17098 646888 ~ 652303 (-)
G336345 NA non-coding downstream 52250 566002 ~ 566242 (-)
G336342 NA non-coding downstream 57884 560308 ~ 560608 (-)
G336287 NA non-coding downstream 63995 552859 ~ 554497 (-)
G336340 NA non-coding downstream 101977 516233 ~ 516515 (-)
G336338 NA non-coding downstream 102296 514344 ~ 516196 (-)
G336374 NA non-coding upstream 22711 652501 ~ 653028 (-)
G336375 NA non-coding upstream 23749 653539 ~ 653776 (-)
G336412 NA non-coding upstream 97265 727055 ~ 727378 (-)
G336391 NA non-coding upstream 131526 761316 ~ 767440 (-)

Expression


Co-expression Network