CI01000133_00229073_00230889


Basic Information

Item Value
gene id CI01000133_00229073_00230889
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000133
NCBI id null
chromosome length 2254871
location 229073 ~ 231122 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000133_00229073_00230889.mRNA
TGCAGACACATTTCCAGAATACCAGTCACAACTCAAACATCTGACGAGAGAATGGCCCACTATTTGTACCAACGAAATAGGACACAATGATGTAGTCAAACACAGCATTATTACCACCAGTGAAGTACCCATCCGTAAGAAACCATTCGGAGTATCACCTGAGAAACAACAATTCATCGAACAAGAAATCAAGAGGTTTGAATTCAAAGACAATACTTACCCCATGCCACAAATACATGAAATCCTTGAGTCTCTGCATGGAGCAGCTATTTTCAGTACCCTCAAACTCAAAAGTGGATATTGGCAATTTGAGATGGAGCCAGAGAGTATCCCCAAAACTGCTTTCACTACATCAGGATTATATGAATTTCTTTGTTTACCTCTCGGCCTCAAATGCCGCAGCCACATTCCAGCAACTGATGGAGTTTGTGAAGTACAACGTTTCTTTGGTCTAGCAAGATGGTGCCACAGATTCATCTCTCAATTTTCCGAGAACGCTGCCCCACTGCATGCCTTGAAAAGGAAAGGAGTCCAGACTGACACTAGTGACATTGGTTTGGGAGCAGTCCTGACCCAAGATATAGATGGTGTGGAACATGTCATTGCCTACGCCTCACCTCCACAGATTGCACGCATCCTGGTGGAAGAGATCTTCACCAGATGGGGTACCCCAATGTATCTGGTATCCGACAGAGGAACTCAATTCACCTCACAACTAATCTGTCAAGTCTGCAAGCAGTGGAGTGTCATTCAAAAACTAGCCACGACTGCACATCCTCAAACAAACCTCACAGAACAGAGTACAGGATTCACTCCAGCAGAAGTCATGCTGGGTCGAAAGCGGAAAGGTCCTTTAGAAAGAGCAATTCTCAAATCGCCTGACCCAGACAACCCAGCATACCCAATTCTGGAGAAGTACAAAGAGCTGATCCAGACCATGCAAAGGAATGTAGAACGAGCCCAGGAAAAACAACGTCATTACTACAACCACGGAGACGACCAGCTCACTTCTAGGTTGGAGACTTGGATTGGGTTCATGCTCATTCTCTGTCACAGGCTAGCGATGGTTTTATGGCCAAGCTTGCTGCGAAATGGAAAGGTCCTGCTAAAGTGATCAAATGTCTTGGTCTTGTAAACTTCTCTGTCTCTTTTGTTGATGACCCTGATCATGTAGATTCTTTTCATGTTCAAAACTTAAAGCCATTTCATGGTACTGTGCAAACTCTTTCTAATTAAGGGGGAGAATATGTAACAGACACTGCCTGTTACATGGTTCATTGGTTTTTATTATCAGTGCTATATTCATCCTGGCCAATAGGGGACACCAGTAGCACACATCCATGGTGA

Function

NR:

description
Zgc:162621 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000133_00229073_00230889.mRNA True 1347 mRNA 0.44 4 229073 231122

Neighbor

gene id symbol gene type direction distance location
CI01000133_00106756_00108024 KCNJ12B coding upstream 120628 106756 ~ 108445 (+)
CI01000133_00023486_00027675 ST8SIA6 coding upstream 201195 23486 ~ 27878 (+)
CI01000133_00000117_00001476 RPL19.L, RPL19 coding upstream 227550 117 ~ 1523 (+)
CI01000133_00246519_00248635 NA coding downstream 15397 246519 ~ 248697 (+)
CI01000133_00297340_00299091 NA coding downstream 64157 295279 ~ 299091 (+)
CI01000133_00868719_00901792 CERK coding downstream 637597 868719 ~ 901827 (+)
CI01000133_01165182_01171198 SRR coding downstream 934060 1165182 ~ 1171461 (+)
CI01000133_01184002_01190221 TMEM19 coding downstream 952880 1184002 ~ 1190774 (+)
G344991 NA non-coding upstream 77559 151314 ~ 151514 (+)
G344979 NA non-coding upstream 106222 122309 ~ 122851 (+)
G344978 NA non-coding upstream 111582 116675 ~ 117491 (+)
G344975 NA non-coding upstream 131585 97146 ~ 97488 (+)
G344973 NA non-coding upstream 132787 96059 ~ 96286 (+)
G345064 NA non-coding downstream 235418 466540 ~ 506249 (+)
G345246 NA non-coding downstream 347942 579064 ~ 579286 (+)
G345254 NA non-coding downstream 355168 586290 ~ 586501 (+)
G345267 NA non-coding downstream 399429 630551 ~ 630785 (+)
G345284 NA non-coding downstream 420482 651604 ~ 651898 (+)
G344985 NA other upstream 81892 142772 ~ 147181 (+)
G346486 NA other downstream 2010731 2241853 ~ 2243321 (+)

Expression


Co-expression Network