CI01000133_01228997_01243085 (SLC37A3)


Basic Information

Item Value
gene id CI01000133_01228997_01243085
gene name SLC37A3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000133
NCBI id null
chromosome length 2254871
location 1228997 ~ 1243208 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000133_01228997_01243085.mRNA
CTATGTCCTGCTTCACTCGTCTCGTAAGACTTTTAGTAACGTAAAAGTGAGCATCTCAGCGCAGTGGACACCGTCAGCATTGCAGCAGAATGGCAGCGATATAACTTTGTCTCCTGGAGAGACATGGGAGGATAACAAACTGTTTGCTGATGCAGGGGAGGCCACTTTGTTTTTGGGTGCTCTGGACTCAATCTTTCTCTTCTCCTATGCTGTGGGTTTGTATATCAGTGGGGTGATTGGTGATCGGTTCAACCTCCGCTATGTTCTGTCCTTCGGTTTATGTGGATCAGCAGTCGCGGAATTTATTTTTGGCACTTTGACAGAATGGCTTCACTTTTATAACGTGTACTTTTATTGCGTTTTGTGGGTGATAAATGGACTGCTGCAATCTACAGTTTGGCCCTGTGTGGTGGCCATCATGGGCAACTGGTTTGGGAAATCTGGCCGAGGCTTTGTGTTTGGACTGTGGAGTGCATGTGCATCCGTGGGGAATATTCTGGGTGCGTTTCTTGCCTCCAGTGTCCTGAAGTATGGCTATGAGTATGCCTTCCTCGTGACATCAGTGGTTCAGTTTGCTGGTGGTGTTGTAGTGTTTTTTGGCCTGCTCACTTCTCCAAAAGAAATTGGACTAAGTGACCCCTCTGAGACAGTTCTGAGATCAGTGACAAGAGACTCAGACAGTCAGCGTCCTCTGATGAGTGATGATGAAGATGAGTTATGTGATGAAAACACCTCCATACAGCAGCAGGATGAGGAGCCTGAACCACAGCCCAAAGCCATTGGCTTCCTACAGGCCTTCTGCCTGCCTGGAGTCCTTCCTTATTCTCTGGCTTACGCATGTCTGAAGCTGGTCAACTACTCTTTCTTCTTCTGGCTGCCATTTTATCTCAGCAACAACTTCAGCTGGAAGGAAGTTCAGGCCGACCGGCTATCTGTGTGGTATGATGTGGGAGGAATTGTTGGAGGAACAGTACAAGGCTTAATCTCGGATCTTTTGGGAAAGCGAGCTCCTGTGTTAGTAGTCAGTTTGGTGCTGGCCATGGGAGCGTTAGTGGGATACAGCCGTTTCCTAATTGGAGGCCCATCAAACATGATCAGTTCAGCGATCTCTGCAGATTTGGGCCGCCAGGAGGCGCTGCAGAACAGTCAGGAGGCTCTGGCCACAGTCACAGGAATCGTGGACGGCACAGGCAGCATTGGAGCTGCGGCGGGACAGTACCTGGTATCGCTTATTGAGAGCAAATTTGGATGGATGTGCGTCTTCTATTTCTTCATAGTCATGGTAGGTAATTGTATTTGCAATGCAACAGCACAAATTCACACATTCAGCCAGTGAAGCATTACAAGCACATCCTTTCATTGGACAAAAAAACTACTCAGTGAACAGTGACTCATTTTCATTTGTCAAATTAAAGGTGAAATGTAATTTTTGTGTAATTAGCATCACCAAACTGAATCA

Function

symbol description
slc37a3 Orthologous to human SLC37A3 (solute carrier family 37 member 3).

GO: NA

KEGG:

id description
K03447 SLC37A3; MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 3

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000133_01228997_01243085.mRNA True 1459 mRNA 0.47 11 1228997 1243208

Neighbor

gene id symbol gene type direction distance location
CI01000133_01200867_01215885 NA coding upstream 13096 1200867 ~ 1215901 (+)
CI01000133_01184002_01190221 TMEM19 coding upstream 38223 1184002 ~ 1190774 (+)
CI01000133_01165182_01171198 SRR coding upstream 57536 1165182 ~ 1171461 (+)
CI01000133_00868719_00901792 CERK coding upstream 327170 868719 ~ 901827 (+)
CI01000133_00297340_00299091 NA coding upstream 929906 295279 ~ 299091 (+)
CI01000133_01316050_01344283 LARGE1, LARGE coding downstream 72842 1316050 ~ 1344478 (+)
CI01000133_01352323_01364807 KIAA0930.L, KIAA0930 coding downstream 108923 1352131 ~ 1364807 (+)
CI01000133_01444214_01450280 NA coding downstream 201006 1444214 ~ 1450387 (+)
CI01000133_01453263_01457636 NA coding downstream 210055 1453263 ~ 1458725 (+)
CI01000133_01534789_01536225 KCNA6, KCNA3.S, KCNA1 coding downstream 291382 1534590 ~ 1536528 (+)
G345520 NA non-coding upstream 31739 1197009 ~ 1197258 (+)
G345515 NA non-coding upstream 32384 1196138 ~ 1196613 (+)
G345552 NA non-coding upstream 36210 1192362 ~ 1192787 (+)
G345548 NA non-coding upstream 53586 1175186 ~ 1175411 (+)
G345561 NA non-coding downstream 20875 1264083 ~ 1264454 (+)
G345510 NA non-coding downstream 43394 1286602 ~ 1328753 (+)
G345500 NA non-coding downstream 133728 1376936 ~ 1388395 (+)
G345582 NA non-coding downstream 140641 1383849 ~ 1384680 (+)
G345509 NA non-coding downstream 172379 1415587 ~ 1425251 (+)
G344985 NA other upstream 1081816 142772 ~ 147181 (+)
G346486 NA other downstream 998645 2241853 ~ 2243321 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location