CI01000133_01444214_01450280


Basic Information

Item Value
gene id CI01000133_01444214_01450280
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000133
NCBI id null
chromosome length 2254871
location 1444214 ~ 1450387 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000133_01444214_01450280.mRNA
ATGTTGGGAGCCCTCACCGCGATCCCTATAAAGGTGCCTCACATCAGCTCTCTGCAGCGACTGGCAGGACACTCACCCAGCGTTCTACCTCAGGTTAGGCCAAAGACCCTCATTCCAGACAGCCTTCCCCACAGCCCATGCCGAGAGCAGCAGTCCGGTCAAACGCTGGTCGTGCCGCAGAGCATGGCTGTGGTCAGCCCAAAAAGCCAAGGCGCATCTTTGCCAACTGCCAACAGCACCTTCAGTCACGAGCGACTGTCCAGCGGGCAGGACGAGAGTTCCTCGTCGCCCTTGTCTGTGCCGAGTGTGTCCACAGCCTCCGCCAGTCCAGGGGTGGCATATGCCATCATCTCTGCAGCCTCGCCAGCAGCCCATGTGGTGTCAGGTGTAACCGAGGCCATCAAGGTGCAACCGCTGATTTTCAGCCCAGACAGCAAGGTTATAATCATTCAGCCACAGATTCCCAGCAACTGCAAGAGTTCTCCAGCCTCACAAACTGACAGTCCTGTGAAGGAGCCAAGCCCTGACCCCTCGACCCCAGCCAAAAAGCAGGAGGATCCAGAGAAAATTGCCTTCATGGTTGGGCTAGGCCTGGTCACTACAGAACACTTGGAGGAGATCCAGAGTAAACGGCAGGAGAGGAAAAGGCGAAGCACAGCTAATCCTGCGTACAGCGGACTGTTTGAACCAGAGCGTAAACGACTTGCCTCCAATTACCTGAACAGTGGGATGTTTTTGTCGGCGAGAGGTAAAATAGATTTCTGCTTCTGTCAACATAATGCTGCTGGGGTAGAGCTGAAAAATAATGCATGAAAAACAGAAACATGTTTGAACAGAATGAATTAAATCCACACATTCTCCATAAGTGCTCATGTTTTAATAGTTGTTGAACCGGGGATGTATTTGACAGAGGTTGACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000133_01444214_01450280.mRNA True 920 mRNA 0.53 6 1444214 1450387

Neighbor

gene id symbol gene type direction distance location
CI01000133_01352323_01364807 KIAA0930.L, KIAA0930 coding upstream 79407 1352131 ~ 1364807 (+)
CI01000133_01316050_01344283 LARGE1, LARGE coding upstream 99736 1316050 ~ 1344478 (+)
CI01000133_01228997_01243085 SLC37A3 coding upstream 201006 1228997 ~ 1243208 (+)
CI01000133_01200867_01215885 NA coding upstream 228313 1200867 ~ 1215901 (+)
CI01000133_01184002_01190221 TMEM19 coding upstream 253440 1184002 ~ 1190774 (+)
CI01000133_01453263_01457636 NA coding downstream 2876 1453263 ~ 1458725 (+)
CI01000133_01534789_01536225 KCNA6, KCNA3.S, KCNA1 coding downstream 84203 1534590 ~ 1536528 (+)
CI01000133_01566113_01567594 KCNA1A, KCNA1L, KCNA1.S, KCNA1 coding downstream 113831 1564218 ~ 1568902 (+)
CI01000133_01624531_01626174 NA coding downstream 173646 1624033 ~ 1626621 (+)
CI01000133_01687929_01695864 NA coding downstream 237542 1687929 ~ 1695864 (+)
G345509 NA non-coding upstream 18963 1415587 ~ 1425251 (+)
G345500 NA non-coding upstream 55819 1376936 ~ 1388395 (+)
G345582 NA non-coding upstream 59534 1383849 ~ 1384680 (+)
G345510 NA non-coding upstream 115461 1286602 ~ 1328753 (+)
G345561 NA non-coding upstream 179760 1264083 ~ 1264454 (+)
G345508 NA non-coding downstream 9813 1460200 ~ 1461368 (+)
G345517 NA non-coding downstream 11900 1462287 ~ 1462590 (+)
G345604 NA non-coding downstream 19165 1469552 ~ 1469899 (+)
G345619 NA non-coding downstream 48120 1498507 ~ 1498728 (+)
G345676 NA non-coding downstream 138447 1588834 ~ 1589072 (+)
G344985 NA other upstream 1297033 142772 ~ 147181 (+)
G346486 NA other downstream 791466 2241853 ~ 2243321 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_029696 PHF21B coding NC_007115.7 CM002888.2 74828055 ~ 74892355 (-)