G346977



Basic Information


Item Value
gene id G346977
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000135
NCBI id null
chromosome length 1546597
location 65945 ~ 66232 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU394985
TTTTGGTTTCAGGCTTTAGTTTCACTAATCCAGACTCATGTTCTGGGTCTTGTCCGGTGTAGACACATTAACAGGCCACAGAGCTGGTGCAAGAACCTGCAGTGGAGAAAAATGAATATAGAAATTTGTGAATGACTCCAGACACATACCTCTGTTTCTCAGACGAGCTGAACTCCGTGTAAACGCACTTGTCACTAGCTGAATCCTTCAGGAATGAACTGGGTTGTGTGATGCGGTTGTCACTCCTGTTAATGAATGAACTGTGTGTGAACTGAATATGTTGCCCAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU394985 True 288 lncRNA 0.44 1 65945 66232

Neighbor


gene id symbol gene type direction distance location
CI01000135_00158065_00158568 YPEL5, BRAFLDRAFT_262914, YPELB coding upstream 91183 157415 ~ 158568 (-)
CI01000135_00164301_00167634 NA coding upstream 96198 162430 ~ 167634 (-)
CI01000135_00215508_00237582 NA coding upstream 149237 215469 ~ 237856 (-)
CI01000135_00255418_00262368 NA coding upstream 189042 255274 ~ 262368 (-)
CI01000135_00288811_00291954 RPF2 coding upstream 222579 288811 ~ 292242 (-)
G346975 NA non-coding downstream 407 63873 ~ 65538 (-)
G347010 NA non-coding upstream 688 66920 ~ 67505 (-)
G347011 NA non-coding upstream 1694 67926 ~ 68158 (-)
G347014 NA non-coding upstream 12394 78626 ~ 78930 (-)
G347007 NA non-coding upstream 17465 83697 ~ 83999 (-)
G347022 NA non-coding upstream 29003 95235 ~ 95447 (-)
G347001 NA other upstream 132084 198316 ~ 496411 (-)
CI01000135_00433702_00445785 BUB1 other upstream 378034 433521 ~ 445785 (-)
CI01000135_00791752_00800033 NA other upstream 699354 790724 ~ 800871 (-)

Expression



Co-expression Network