CI01000135_00791752_00800033


Basic Information

Item Value
gene id CI01000135_00791752_00800033
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000135
NCBI id null
chromosome length 1546597
location 790724 ~ 800871 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000135_00791752_00800033.mRNA
AAATTGGAGTTTTTTTTAAAATTGAAATTCTGAGAAGAAAAGTGAATTGTCAGATATTATTTTGTTATTCAGTAACGGGGAAAAAAACAGATAAAAAAATATCAGAATTGCGAGATATAAGCACGCAATTGTAAGAAAAAAATGTCAGAACTGTGGGATAAAAAGACACATTAGGTCTACCTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAATTATTCCGTGACGGAAACAAGAGTCCTATAATGTCAGCACAAAATCAAAAGAAAGTTATATTAGCCTATTTTAGGATCGTAAAGATTTTCTTACACATTTTTCCCGCCTCTTGATGATGCACAAAATTTGAATTATGCAGAAGTCCACATGAGATTTACAGCATACACGAAGACTTTGAAATACAGTGCAGGAGTCATACATTTTTGATTGCGTAAAACAGCAGCGTTTGTGACGAGCACAAATATCTCATTTTGTGTTACACCGAAGAAATTGGGGGTTGAAACTACACGAAAGTGAGTAAATAATGACGGAACCTTCAGTTATGTGTAAAGTATTCCTTTTAAAACAATACCGTCACCTTTGTTTTTTGAAACGCTTTTCCCTTAGAGCACCGCGTGTCCCCTCTGACTGCCCGTACCATGTGTGTGGTGTTGTGTTGCAGTAAACACTGTATGATCTGTTTTTAACTCGAAAGCTGATCCTGTAGTGCAGCAAATTCAGAAATACACCTGACGAGGAAAACGATTTAATCGATTAAATCACCTGAGAAATTAACTACATGACTTCCATCTCATAGCCGCTGTCACAAACGATCATCAGACACCCGGACTAGATTGATTGGACATGATCAGTCGCCACTTTCTGCTCGCTAGATCGTTAAAGCGCTTATCAGGGCTGTTTAATGCAGGCGTCCACTCAGAAGTGCTCAAGTGTAGTAAGGTGGAGCTGCGGGTCATATCTCAGTCATATCGCGCTGCTCAGAGCCCGTGTTGTGTGAGTGTGAGGCGGGCAGTAGTGTGTGCTGAGGGTCAGTCGAGCACCATGGAGGACAACAATAACAACTCTGTGTCCACGCAGACCGCCAGTCAACTCAAGGACACTACCAAGGTGTGTGCTGTGAGATGTGTGTACGTGACAGACAGACAGTGCTTCTTCTTTATGTGCAGGACACAGATAGGAGGCGCGTCTGTAATCTTCCCACAGGACAGGCTTCCTGCCGAGGGCGTTAAGAAGCTGGATCCGGCGCTGTTCTCCGACTTCGAGAGCCGTGTGTTTGGAGACGAATGCGTGTGTAGAGTGGACCTGTGCTCCATGCTCAAGAAAAAGACCGCAGATGGATACTACCACCGCGAGAAGAGCGTCACGTTCAGTGAGTAAACCTGCTCTGAAGGTTCATCTTTGTACGTCTGGTTCCTCTGGTATGAGGCAGTGCTTCTGGACTGGACGGGTCACAGGTGTAACTGAGGTTTGGACAGCAGAGTGAACACTCCTCAGCCTTTAAAATTGAGGAGAAACACTGATATAATACCCAGCAGCTGTTCTTTGCATTAACATCGTCGGTTCAGTGAAGCCGGTTGAGAAGCACTGCTGTAGAGCACATCTTCTGGCTTGTGATTTGGGCTCAGGTTTGCAGGTCATTTCCAAACTCTAGGTCTTTTATTTCAGTCTGGTACTGTGTGATGGTTTTAAATAATAATGCCGTATTATATACCACAGTACTGTTTTGTATTGTTACAGTGTTGGTAGTGTATGTAAATGAAGAGAGTTTACTCTTTTTCTGTGTTACCTGGAGCGAGTAATTCACGTTTATTTGTCAGTAAAAGTCTTTTGACAGCTTCAGGGCTTTGGTGAAAAACAGCATTATGGTAAAATGGATCACTATTGACAGAGTTTTGCTTCAGGTGGAACTGAAGGAACGTCCGTTTCTTTCAATCTTTCTCCTCTGTTTGGCCTAAAACACTGTTCGTGCTCATCCAGTTTGAAATGTTGACTACAAACACTGAGGTTTTTCAGATCTTCCATCTCTGTGTTCTCTCCGTAATTATGATTCTTTGAAGTCTTTAGCTGCTGCCTACATCACGCTGGACCTTCACTGAAACTGAAGCTAACTCACTCCCGCTGAATGTTTACTCTGAATTCTTGCTCTCAGTAACAAAACAAGTTAACACCATTATAACTAAAAGTTTGCTAAGAAGTATTACCTGCTAAAGCAAGGCGGTATTTGACTCTTTATCCATAGCAGACTGGTGGGCGTGGCCTTGGACAGCAACATGCCCAGTGCATTATTAATCATACCTTCAAACTAGTCGCTTTTCAGTGAAATTCGCCATTTTGAATCAAAAGATGTCATTTATGTGAATCATGTAGATCCGAAGAGTTTTTTTTACAGGGGGAACTATATTAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000135_00791752_00800033.mRNA False 2400 mRNA 0.42 3 790724 800871

Neighbor

gene id symbol gene type direction distance location
CI01000135_00707778_00716012 NA coding downstream 74712 706901 ~ 716012 (-)
CI01000135_00696281_00705815 NA coding downstream 84224 696281 ~ 706500 (-)
CI01000135_00679808_00684801 NA coding downstream 105923 679570 ~ 684801 (-)
CI01000135_00623693_00630930 AKIRIN2, CF166 coding downstream 159254 623473 ~ 631470 (-)
CI01000135_00609374_00620722 RARS2 coding downstream 170002 609347 ~ 620722 (-)
CI01000135_00881762_00883731 NA coding upstream 80103 880974 ~ 883731 (-)
CI01000135_00909940_00911418 TMEM200A coding upstream 108887 909758 ~ 911564 (-)
CI01000135_00935305_00937803 L3MBTL3 coding upstream 133603 934474 ~ 939483 (-)
CI01000135_00949536_00968521 NA coding upstream 148665 949536 ~ 968521 (-)
CI01000135_01036648_01040176 LAMA2 coding upstream 235642 1036513 ~ 1040176 (-)
G347194 NA non-coding downstream 66243 724207 ~ 724481 (-)
G347193 NA non-coding downstream 73566 716804 ~ 717158 (-)
G347161 NA non-coding downstream 92354 677545 ~ 698370 (-)
G347162 NA non-coding downstream 104554 685358 ~ 686170 (-)
CI01000135_00524340_00537589 NA non-coding downstream 256541 524149 ~ 538715 (-)
G347198 NA non-coding upstream 4408 805279 ~ 877916 (-)
G347172 NA non-coding upstream 24673 825544 ~ 846398 (-)
G347219 NA non-coding upstream 78851 879722 ~ 879945 (-)
G347231 NA non-coding upstream 90630 891501 ~ 891784 (-)
G347235 NA non-coding upstream 93537 894408 ~ 894615 (-)
G347001 NA other downstream 294313 198316 ~ 496411 (-)
G347279 NA other upstream 346132 1147003 ~ 1216826 (-)
G347296 NA other upstream 531493 1332364 ~ 1366129 (-)
G347242 NA non-coding upstream 84763 900842 ~ 901091 (-)

Expression


Co-expression Network