G347279


Basic Information

Item Value
gene id G347279
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000135
NCBI id null
chromosome length 1546597
location 1147003 ~ 1216826 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU395335
TTCAACACAAAAGATGAACATGACGGCACATGCTAGTGGATGAGTTGAATCAACTCCACAGCAACTACATAAATTTATCCACTAACCATTCAGAAACGTCTAAAAGTTGTAACTTCTTCCTGAGTCTCTCCATCAGTGTCGACTCCGGTTTGAACAATGTAAGGCTGAACATCGTCGTCATTTTGGCTGCGTGAGATTCTCCAGCTTTGTTGTTGTTGAGCGACCGAAGCGCGAGCTGTTAAAGCTCCGCCCTCTTCTGGAAAGGGGGCGGGAGCAGCAGCTCATTTGCATTTAAAGGGACACACAAAAACGGCGTGTTTTTGCTCACACCCAAATAGGAGCAAATTTGACAAGCTATAATAAATGATCTGTGGGGGATTTTGAGCTGAAACTTCACAGACACATTCTGGAGACACCAGAGACTTATATTACATCTTGTGAAAGGAGCATTATAGGTCCACTTTAAA
>TU395336
GGCCATGTTGGGCTGCTTTAGAGAAGAGGAAGAGTTGTTGTAGTAGAGTGTTGTTGACATGCNNTCATTTTACGCCGGACTGCTTCACAAACGAGGGTCAATTCAACACAAAAGATGAACATGACGGCACATGCTAGTGGATGAGTTGAATCAACTCCACAGCAACTACATAAATTTATCCACTAACCATTCAGAAACGTCTAAAAGTTGTAACTTCTTCCTGAGTCTCTCCATCAGTGTCGACTCCGGTTTGAACAATGTAAGGCTGAACACCGTTACTGACAATCCTCATTTTGTCTGCGTGAGATTCTCCAGCTTTGTTGTTGTTGAGCTGTTAAAGCTCCGCCCTCTTCTGGAAAGGGGGCCGGGAGCAGCAGCTCATTTGCATTTAAAGGGACACACACAAAAACGGCGTGTTTTTGCTCACACCCAAATAGGAGCAAATTTGACAAGCTATAATAAATGATCTGTGGGGGATTTTGAGCTGAAACTTCACAGACACATTCTGGAGACACCAGAGACTTATATTACATCTTGTGAAAGGAGCATTATAGGTCCACTTTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU395335 False 467 lncRNA 0.43 2 1147003 1216308
TU395336 True 566 TUCP 0.43 3 1147003 1216826

Neighbor

gene id symbol gene type direction distance location
CI01000135_01069416_01096641 NA coding downstream 50314 1069163 ~ 1096689 (-)
CI01000135_01057682_01067405 NA coding downstream 79598 1057426 ~ 1067405 (-)
CI01000135_01036648_01040176 LAMA2 coding downstream 106827 1036513 ~ 1040176 (-)
CI01000135_00949536_00968521 NA coding downstream 178482 949536 ~ 968521 (-)
CI01000135_00935305_00937803 L3MBTL3 coding downstream 207520 934474 ~ 939483 (-)
CI01000135_01241553_01250988 NA coding upstream 25230 1241538 ~ 1251157 (-)
CI01000135_01402249_01402515 NA coding upstream 185826 1402134 ~ 1402515 (-)
CI01000135_01415988_01419906 NA coding upstream 199561 1415869 ~ 1419906 (-)
CI01000135_01423494_01425551 MMACHC coding upstream 206769 1423077 ~ 1425555 (-)
CI01000135_01482974_01491167 DCAM, AMD1 coding upstream 265627 1481935 ~ 1491167 (-)
G347177 NA non-coding downstream 129398 1007695 ~ 1017605 (-)
G347257 NA non-coding downstream 140717 978233 ~ 1006286 (-)
G347250 NA non-coding downstream 197827 948966 ~ 949176 (-)
G347249 NA non-coding downstream 198195 948516 ~ 948808 (-)
G347247 NA non-coding downstream 213612 933035 ~ 933391 (-)
G347293 NA non-coding upstream 7492 1223800 ~ 1224018 (-)
G347348 NA non-coding upstream 88496 1304804 ~ 1305534 (-)
G347390 NA non-coding upstream 156987 1373295 ~ 1375456 (-)
G347410 NA non-coding upstream 211455 1427763 ~ 1428079 (-)
G347436 NA non-coding upstream 301893 1518201 ~ 1528861 (-)
CI01000135_00791752_00800033 NA other downstream 355058 790724 ~ 800871 (-)
G347001 NA other downstream 650592 198316 ~ 496411 (-)
G347296 NA other upstream 116056 1332364 ~ 1366129 (-)

Expression


Co-expression Network