CI01000135_00949536_00968521


Basic Information

Item Value
gene id CI01000135_00949536_00968521
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000135
NCBI id null
chromosome length 1546597
location 949536 ~ 968521 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000135_00949536_00968521.mRNA
TTCCGCGTGAATGAGTTTGGGGTCCTGGAGGTCATAACGGACGAGATGGAGGAGGAGAGGGGCAAGAAAGCTCACGCCACCACCACATGGAGCGTCCCCACGGCTCAAGAGGCTCTGTCTGAGCGGCCCGTCTCGAAGGAGGAGACGTCATGGGCCCAGCGCGGCCTGGTGTGTGTGCGCTGTAACAGGAAGGGCTCCGTGGTGGACTTCCTGTCTAATGGACTTCACTGCAGTGAGCGCTGTCTGCAGCAGGAGCAGCAGGAGGAGCTGAAGAGAGAAAGCTCCAGGACGAACGGAGAGGTGCTCGGGAGGAAGAGATCCCGCCTGGCGGAGAGACCCACTGAAGACGTGGACAGCTCCATAGAGGTCGCTGAGGAGGATGACGAGGACTATGAAGAGAAAGAAAGCAGGCGACCAGCACGCGGGGCTACGCGAGGCCGCAGGAAACGCCGAGGAGATGCAGCGCTGCTCAGATACACGGTTCCATATGGAGGCAAGAAGAAGGCGTGGTGTTGGGCCTCGTACCTGGAGCAGGAGAGAGCCATCGCTGCTCCAAGTAAACTGTTCAAAGAGTGTAAGAACGGCTTCAGGGTTGGCATGAGACTGGAGGGTATCGACCCAGAACACCCGTCCATGTACTGCGTCCTCACCATCGCTGAGGTGTTGGGACATCGAATCAGACTGCATTTTGACAAATACTCGGACTGCTATGACTTCTGGATAAATTCCAACTCTCCTGACATCCACCCGGTGGGATGGTGTGAGAAAACCGGACACAAGTTGTATCCACCTAAAGGCAAGAGACACCAGCCGTTCAAAGAATACCCAGAATTCAATCCAAGTGATGAAGAGTTTAGCTGGTCCTCCTACATCAAACTAAATAAAATACAGACGGCACCCAAAGCCCTCTTTCATAATCAGAACATGACAGTGACGCCGTCAGGGTTTAGGGTTGGTATGAAGTTGGAGGCCATCGATAAGAAGAATCCCTCGTTCATCTGTGTTGCCACGGTTACCGACATGGTGGATAGTCGATTCCTGGTGCACTTTGACAACTGGGATGAAAGTTATGACTACTGGGGGCGGCAGAATCCACACACATCACTGACACTGACTGAGAGAAGTAACAGATGTCTGTCTCACACTCACAGAGAGCTGTCAGATCTCACTCTCACACCCATCATTCGTGATCCTCCACAGAGAGAGAAAAGACTTTCGCCCTTCAGTCTTTCTCTTACACGCACAATCAATACTTGGTTTACACGTGTCCGTCTTGTTCCCATTCATTTTGATGGCTGGACAGATGAATATGATTACTGGATCGATGCAGATAGCCCAGATATTCATCCTGCCGGCTGGTGCGCCAAAACTGGACATCCACTGCAGCCTCCAATCACTCCTCAGGACATGTTTGAGACGTCGGAGCAGGGCGGCTGTCCCACGGCCGGCTGTAAGGGAGTGGCGAGTCATGTGTGTAAATCGACCATGTGTTCTGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000135_00949536_00968521.mRNA True 1497 mRNA 0.53 13 949536 968521

Neighbor

gene id symbol gene type direction distance location
CI01000135_00935305_00937803 L3MBTL3 coding downstream 10053 934474 ~ 939483 (-)
CI01000135_00909940_00911418 TMEM200A coding downstream 37972 909758 ~ 911564 (-)
CI01000135_00881762_00883731 NA coding downstream 65805 880974 ~ 883731 (-)
CI01000135_00791752_00800033 NA coding downstream 148665 790724 ~ 800871 (-)
CI01000135_00707778_00716012 NA coding downstream 233524 706901 ~ 716012 (-)
CI01000135_01036648_01040176 LAMA2 coding upstream 67992 1036513 ~ 1040176 (-)
CI01000135_01057682_01067405 NA coding upstream 88905 1057426 ~ 1067405 (-)
CI01000135_01069416_01096641 NA coding upstream 100642 1069163 ~ 1096689 (-)
CI01000135_01130311_01159673 LAMA2 coding upstream 161790 1130311 ~ 1159673 (-)
CI01000135_01241553_01250988 NA coding upstream 273017 1241538 ~ 1251157 (-)
G347250 NA non-coding downstream 360 948966 ~ 949176 (-)
G347249 NA non-coding downstream 728 948516 ~ 948808 (-)
G347247 NA non-coding downstream 16145 933035 ~ 933391 (-)
G347244 NA non-coding downstream 26227 922926 ~ 923309 (-)
G347242 NA non-coding downstream 48445 900842 ~ 901091 (-)
G347257 NA non-coding upstream 9712 978233 ~ 1006286 (-)
G347177 NA non-coding upstream 39174 1007695 ~ 1017605 (-)
G347279 NA non-coding upstream 178482 1147003 ~ 1216826 (-)
G347293 NA non-coding upstream 255279 1223800 ~ 1224018 (-)
G347348 NA non-coding upstream 336283 1304804 ~ 1305534 (-)
G347001 NA other downstream 453125 198316 ~ 496411 (-)
G347296 NA other upstream 363843 1332364 ~ 1366129 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location