CI01000158_01216424_01216750


Basic Information

Item Value
gene id CI01000158_01216424_01216750
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000158
NCBI id null
chromosome length 1938735
location 1215763 ~ 1217237 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000158_01216424_01216750.mRNA
GTATATATAGCGCGCGAGAGGGCATGATTGACGTGTCCAGCGCGAAAAGTTCCATGACACCGGCAGCTCAGTCAAACTCGCACGCGCTGCCTGGAACTTTTCATGCTGAAACGTCAATCATATTCTTTCGCGCGCTATACTGCACTCGCGTTCGCAGTAACTTTTCAGACCAGAACCGAACGCCAATCATACTCTCTCCCGCGAGCGCACAGAACAGAGAAACAGCCTTTCGCTCTTTTAACAACGGACCGCTACCAATAAACTTTTTTTCCCTGAAATGCAGCTCACCTGACTGGCTGAAATGGGCATTTAAACTTGTAACGGGTACGTACGGTAGCCTATATTCCATGCACTTTTCTTTTAAAACGAAAAAAACTTCTGTACTCACCTTATTCCAATACTAAATTGAGAAGACGAAATCCTTGAAATTAGCTATATAGCGTTACCCGTGGCGACTTTGCGTGCATAAATATTTTTTTTTTTTTTTACTGATGCAGAAATAAAATTGACTCTTTTTATCGATAGTCCACATGTAAAGTTTAGTCTTCGCATCTCGTAACTCCTGCGCGTGCTACCAGTTTACTAAAGACGACATGTCGCGTTAATTAGACGCAAGAAATTCTACCAGCGCGTGACTGATAACTGACAACAACTTTCTTGCATGAACTACAAGCACTGTCAGCGACAACACAGCATCCGAGGAACAGAACGTATCCGCTGCTTGTTAAAAGTCTGGCCGCGCGCTGTCTTCATTAAAGAGATTTCCCCCCTCATAAATAAAACTTACTTTTCCCTCGCTTGGCTGTCGGACGGTACGTTGTTACTCTTGCCTTTGGCGTACATGCTTGCAGAGAGCTCCGATTGTCACGCACCTGTCAACCCATCACAGCCTCCCCGGACACAACCCCGTCACCATGGTGACTACAGGAGCGATTCCTCTCATTGGACAGAGCGCCGAGAAGGAACGCCCATTTTGTTGGGTAACTAGCGTGAGTGACAGTTACTCGGCCCCGCCCCGACAGAAACACAACCCCTTTCTTATCTCCGGCACTCTTGTCTGTGGAACACACACACATACACGCACTTCGTCTTACCCGGCACTGAGGGGAATTTGAAACCGTACTGAGAGGGATTTTAAACAACTGGCTGTTCCCCTCACAAGCAATCACACCCTCTACTGTCACTGGCCAAATTTAAAGTGATATGGCAAATGTGGAGCGGATTCTTCAGCTTCTGTATATACTGTGGATTGAAATAAGATTATTTGGGCCGTGAAAATCTCTTTTCATAAAGTACATTGATAACTAATGCTTTTCATAGTATCTGTTTATCTTCTAAAAAGTTGATGAATAGCACTATAGCAGTTTAGACGGCAAAATACAACCTAAAAAAGGAGAGATATGCTTTACTTCTGCGTGTGATAATGTTTGTGGCAATCTAAACATCCCTAATGTGTTTTATGAATCAGCTAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000158_01216424_01216750.mRNA True 1475 mRNA 0.44 1 1215763 1217237

Neighbor

gene id symbol gene type direction distance location
CI01000158_00983889_00993672 RHOBTB2 coding upstream 221709 983889 ~ 994054 (+)
CI01000158_00955930_00956923 NA coding upstream 257998 955090 ~ 957765 (+)
CI01000158_00923138_00936354 FGFR1B coding upstream 277972 923138 ~ 937791 (+)
CI01000158_00885015_00891759 KCTD9B, KCTD9 coding upstream 323524 885015 ~ 892239 (+)
CI01000158_00878419_00882435 ACTY, ACTR1, ACTR1A, ACTR1A.L, ACTR1B coding upstream 333328 878108 ~ 882435 (+)
CI01000158_01221423_01241226 ATG10 coding downstream 4186 1221423 ~ 1241431 (+)
CI01000158_01271157_01297723 XRCC4 coding downstream 53920 1271157 ~ 1298361 (+)
CI01000158_01309383_01335186 VCAN coding downstream 92146 1309383 ~ 1335400 (+)
CI01000158_01392749_01393057 NA coding downstream 175512 1392749 ~ 1393285 (+)
CI01000158_01394592_01407483 RASA1B, RASA1, RASA1A coding downstream 176437 1393674 ~ 1408189 (+)
G363528 NA non-coding upstream 3519 1211903 ~ 1212244 (+)
G363454 NA non-coding upstream 151457 1064025 ~ 1064306 (+)
G363453 NA non-coding upstream 153395 1062160 ~ 1062368 (+)
G363449 NA non-coding upstream 157519 1058022 ~ 1058244 (+)
G363448 NA non-coding upstream 158908 1056644 ~ 1056855 (+)
G363531 NA non-coding downstream 29817 1247054 ~ 1247303 (+)
G363539 NA non-coding downstream 36170 1253407 ~ 1253642 (+)
G363391 NA non-coding downstream 209916 1427153 ~ 1447839 (+)
G363390 NA non-coding downstream 231064 1448301 ~ 1451463 (+)
G363378 NA non-coding downstream 235023 1452260 ~ 1453741 (+)
CI01000158_01687966_01688623 CRYBA4 other downstream 470730 1687966 ~ 1688784 (+)

Expression


Co-expression Network