CI01000158_01392749_01393057


Basic Information

Item Value
gene id CI01000158_01392749_01393057
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000158
NCBI id null
chromosome length 1938735
location 1392749 ~ 1393285 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000158_01392749_01393057.mRNA
ATGTCGGATGTGGGATGGACGCAGCAATGCGGACGATCAGGAACAAAAATAAAGGAACCATCGCGAGGAAACTTGTGTATGTCCGCTGGTTTTCCAGTAAAGCCTCGATCCGTCCCGTGTTTCAGCTGTGATGCAGATGTAATGGCAGAGAGACTCGCAGCGAGGATGTCCGGTGATGCTGTGACTCCGAGCAGTGATGCTGCTGCTTCTTACTGCAGTGATGAAGATGATGATGGAGACTCGACACTGGCATCAGTGAAGACGCACCCACTGATCCATTCATCCTCAGAAAGCAAGAAAAAATACTGAACTTTAATATCTAGGGCTTACAGGGAATTTAAATGTAGCTACTGAAGGTACTTTACAGAGTTAAACAAATATAGCCTACAAAACAAACAAAGAAATGAAAGAAAAAATAGGGGCACGTAATTGATTTGACTCTCCAATATTCGTGATGTGCAACGTAAAATCCCCACGTGCAAATGTAATGTTATAATGTCCCATATTAACCTACTTTATTGGCTGTTTTACAAGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000158_01392749_01393057.mRNA True 537 mRNA 0.43 1 1392749 1393285

Neighbor

gene id symbol gene type direction distance location
CI01000158_01309383_01335186 VCAN coding upstream 57349 1309383 ~ 1335400 (+)
CI01000158_01271157_01297723 XRCC4 coding upstream 94388 1271157 ~ 1298361 (+)
CI01000158_01221423_01241226 ATG10 coding upstream 151318 1221423 ~ 1241431 (+)
CI01000158_01216424_01216750 NA coding upstream 175512 1215763 ~ 1217237 (+)
CI01000158_00983889_00993672 RHOBTB2 coding upstream 398695 983889 ~ 994054 (+)
CI01000158_01394592_01407483 RASA1B, RASA1, RASA1A coding downstream 389 1393674 ~ 1408189 (+)
CI01000158_01442232_01445146 NA coding downstream 48902 1442187 ~ 1445826 (+)
CI01000158_01572487_01576220 NR2F1, NR2F2, NR2F1.L, NR2F1A, NR2F1B coding downstream 178594 1571879 ~ 1576713 (+)
CI01000158_01669583_01670236 CLDN5B coding downstream 276124 1669409 ~ 1671092 (+)
CI01000158_01687966_01688623 CRYBA4 coding downstream 294681 1687966 ~ 1688784 (+)
G363539 NA non-coding upstream 139107 1253407 ~ 1253642 (+)
G363531 NA non-coding upstream 145446 1247054 ~ 1247303 (+)
G363528 NA non-coding upstream 180505 1211903 ~ 1212244 (+)
G363454 NA non-coding upstream 328443 1064025 ~ 1064306 (+)
G363453 NA non-coding upstream 330381 1062160 ~ 1062368 (+)
G363391 NA non-coding downstream 33868 1427153 ~ 1447839 (+)
G363390 NA non-coding downstream 55016 1448301 ~ 1451463 (+)
G363378 NA non-coding downstream 58975 1452260 ~ 1453741 (+)
G363583 NA non-coding downstream 72700 1465985 ~ 1467081 (+)
G363594 NA non-coding downstream 90901 1484186 ~ 1484718 (+)

Expression


Co-expression Network