CI01000168_01110611_01115503


Basic Information

Item Value
gene id CI01000168_01110611_01115503
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000168
NCBI id null
chromosome length 1293618
location 1109835 ~ 1115623 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000168_01110611_01115503.mRNA
AGAGCTGAGGGGTTAAAAACCCAGTTACCCTGCAGCACCTCTGGCTATTTATTCATTCAAGTGCAAATTTGACTTAAAAATACACACAAGTGTAGTGCAATTATTCCGTTTGCCATAAAAATGCAAAGCAGCCACCTTTTAAAGGCAGTTCTGTGCCTTTTCATGCTGTTTCATGCTTGTTTCAGTGCTGACAATTTTAAATCGAGTACTTACTGTATTTGGACCAGATCCACTTCAGGTGGGCAAACACAGTATGCATTTCTCCGGAGAACTCAGACATCTCTTCTCTTGTTTGACAGCATCTGGAACAAAAACAACAGCCTTTTTAGTTGCATAACAAGTGATGAGCAATCTGTTATTGAGAGTTACCTGTCCAGGTGTTGGGAAGACAGCTCTTTCTCAGAGACCCTTGATGCACGCTTTGACATCAGTCAGCTGATTGAACCTGATGGCCCCTGTGAGGCTGCTGGTATTACGGAGGAATTTACAGCATCCGTACGAAGGGCCAGAGACCTAAAGAGTGTTAAACCCGATGGATCCATGTACCAGGATAGTGGAGAAAGTTCCAGACAGACACTTCACCGATCAAAGCGCTCGTGGATGATTCCAGGGACTCTGTGGTGTGGCTCGGGAAATAAGGCTACTGGCTTTACTGACCTGGGTATCTTTGAGGAAACCGATAAATGCTGCAGAGAACATGACCACTGTAAAGACACCATCGACTCTTTTTCATACAACTATGGTGTCTTCAACACAAATATCTTCACTTTATCACACTGCGATTGTGACAACAGGTTCCGCCGCTGTCTCCTGGGTGTTAATAATACCATGTCCAACCTTGTGGGCTACGGATACTTCAACGTGCTAAAGATGCGCTGCTTCGAGTTTTCTCAACGGATGCAGTGTGCGAAGAGAACGTGGTGTGTAAATTCAGAACTTGCTCAATACGCCGTGGTCAAAGACGCAGCAAACTACACCGACACGCTCCCTGAACAAGACATGGAGACTCTGGAAATGAGTTTCCATCAAGCAATCACTTTAGGACAAAACCAGGTCACCAAAAACATGGAAGAATCGCTTATCATGCAATCCAAAGATTCCAAGAGCAGCACTGAAGAGCCGAGTCCAGTTTCTACATCATCACCATGGCCATCTGTTACAACGCTGCTGTCCCGGAAATCTGAAGCTTCCGTAGTCACAACATACGCACCAAAGACAACAATCCCCCAAAATAAACCAGACAGACAACATCAAGGCAAGTTTGAGATGTGTGGCCTCTACAGGGATCTGGATTCATGCCATCTACAGATCCCTGCTTTACAAGAGAAATTCGGTTTACGAAACCCTGACCTGAGAACCCTTTATCACTGTAACTGTACTGCCAGGCTCGTCCAAAAGATCTTGTCGAAAGAACTGGATGAAACTGACCCTGTGCATTTGCTGTTGATGGACTTTGTGTCACAATCCTGTTTCACCCTACCACAGACTGAGAACTGTCTCAGTGGAAAAAGTTGCTCAACCCATCCACCAGAAGCACAGCTCATCCAACACTGGAGGAAAGACGTGGCAAGTGGACGACATCTAGTGGACTTCAAGCGCAAACTCAAGAGGATGAACCTCAAGCGCTCTAAGAGAAAAGACTCTCCAGTCAGATTATATAAGAAATGCATCAGGATGCACACTAAACGGCAGAGACCTCGAGTTCCTGAACGGAAACTGTCATAAAGCCCATTTTAACTCAACAAAGCAGAACAAAACTTGCAATGGGAATGGGGGAAACGTTTTTCTTCATAACTCACAACCTGCAAAAAATCTACATTTTGGTGTAAAGAATTTGTGCTAAAATAGTACAGTGAATATATTTATATCGAGAAACACAGGGTTATAGTCGGCTATTACATTTAGCCTAATAGGTCAGAGTGTTACGGTTACCTCGTTATGGGGTAATTGTTATTTTACAATAGCTGCAAGGAATTATGTGCATTTAAAGCAAAATTGTGAAATCTGTCTACATTAATAATTGGAAATGGATATTCTGCCACACACTTTAGTTAATGCATCTTAAAAATTCAAAAGCTATAGAATTTTCTTTCATAGCTATTTTTAGAGCCTCAACCTCACAGCTATGCTAAGATCGACGAGCTAGCCATAGATTTCAATCAAGTCGAACTTTACTCCACAATCCAGAGATAAACTAGATATAAGTTTGAATTCAAACCCATGCGAACTTTATACAGCAGTATTGAACATCCCAAAATCATTTTCATACCTCAAAATCTGTTTTCCGTTATGTTTTCCTCCTGAGGCGCAATTCCCGCTTATTCTCCTCAGGTAGAGCGGCATGCAATTGCGCATGCGCCGAAATGTCACCACTCTTGAGGATTTACAATATGTTTTGGATTCTGCTACCTAATATTTGCACTATATGTTAATTAATGCAACAAGCGAGTGTTGCAAATGTATGTACATTTGTAAATAACATGTAAATGAACTTTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000168_01110611_01115503.mRNA True 2501 mRNA 0.42 7 1109835 1115623

Neighbor

gene id symbol gene type direction distance location
CI01000168_01097284_01099844 NA coding downstream 9991 1097094 ~ 1099844 (-)
CI01000168_01023228_01030414 NA coding downstream 78922 1022405 ~ 1030913 (-)
CI01000168_00969712_01008179 NA coding downstream 100065 969572 ~ 1009770 (-)
CI01000168_00934568_00949104 NA coding downstream 160731 934230 ~ 949104 (-)
CI01000168_00869412_00895047 NA coding downstream 214788 869325 ~ 895047 (-)
CI01000168_01121464_01135373 RPH3AA coding upstream 5134 1120757 ~ 1135373 (-)
CI01000168_01151161_01160955 PTPN11, PTPN11A coding upstream 35346 1150969 ~ 1160955 (-)
CI01000168_01202307_01215499 BRAP coding upstream 86168 1201791 ~ 1215499 (-)
CI01000168_01222730_01228035 VDAC3, VDAC2 coding upstream 106862 1222485 ~ 1228035 (-)
CI01000168_01250022_01255577 NA coding upstream 134349 1249972 ~ 1255577 (-)
G370979 NA non-coding downstream 66154 1042636 ~ 1043681 (-)
G370981 NA non-coding downstream 88940 1015060 ~ 1020895 (-)
G370986 NA non-coding downstream 180331 922253 ~ 929504 (-)
G370968 NA non-coding downstream 338582 770590 ~ 771253 (-)
G370977 NA non-coding downstream 354536 750495 ~ 755299 (-)
G370950 NA non-coding upstream 46503 1162126 ~ 1167426 (-)
G371046 NA non-coding upstream 145939 1261562 ~ 1281486 (-)
CI01000168_00807511_00815389 PITPNB other downstream 287814 807472 ~ 815389 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_001833 pla2g3 coding NC_007121.7 CM002894.2 3520256 ~ 3532997 (+)