XLOC_011909 (tex36)


Basic Information

Item Value
gene id XLOC_011909
gene name tex36
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 8748655 ~ 8754425 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00023543
AGCTCTCACCTGAGTTCACCTACAGGCCGTCGCGTCATAAACGTTTGGAGAAATACTACAGTTTACTGTTCAAATTAAAACTCACGCAATGAGTAAAGGAGGCAAAAGATACTTTAATAAGAACAAGAGTGTAAACTGGTTTGTCCACACTGGTTTTTCACAAACCGAACAGACACATCATCTTTGCACCAGCACAGGTTCAGCACTGGCACATGCTGTTTCTCAACCACTGACACCATCAGAGCAGCGATATCCCAAAGTATTTATCAATCCTGAGAAGAAAACAATGGGCAGAGAATATCCATTATCCATGCATGATAACCGCACAGCACTGCAGCAATGTATTGATGTATATGACCAGGGTTCAGGCCGTAAGAAATGTCTGGATGAGCGTCGCCAGCATAACTCTCATTACAGCCTGCGCCATCATCATCATGGCACCCCGAGtctggttactgcagtaaagtGGGAAGACTCAGTTTATCAGAAGGACTTCCTGCCCAGACAGCAAATAGAGAGCAGAGAGGACAAAATCAGAAGGCGTTTCCCTAGAGATCACTCGGCGAGGTCTCAGGTGAACGCTGCGGCTCAGGCTGATCAGTGTTTTATGTGGTTTGGGAGGGATGACGCTAAACAGTTCACTCCTTTAAGTGTACTAGCAGACGCTAACCACTCATTAACTACCTGAATCAGAGACGGTCCGAACACAGTTAATGATTATGACACTGCAAAGGAATCTCTTAATAAGTGTGCTATTtgaccagcagaggtcagtgTGCTCATTGTTAATATTGTGCTTGCACCGTCATAAAATCTGAAGGGTTTCATTCTGTAAAGTGTTAAATGACATATACAGTGTATTATGACAACAGAAACTTAGTCagaatttgttatttttgttagtttcagggtgattataatgaaataaataaaaacgttaCACTTA
>TCONS_00024830
CCATCCAGAAGCTCCACAAAACCACGAATCACGCAAAGAATCACAGCTCTCACCTGAGTTCACCTACAGGCCGTCGCGTCATAAACGTTTGGAGAAATACTACAGTTTACTGTTCAAATTAAAACTCACGCAATGAGTAAAGGAGGCAAAAGATACTTTAATAAGAACAAGAGTGTAAACTGGTTTGTCCACACTGGTTTTTCACAAACCGAACAGACACATCATCTTTGCACCAGCACAGGTTCAGCACTGGCACATGCTGTTTCTCAACCACTGACACCATCAGAGCAGCGATATCCCAAAGTATTTATCAATCCTGAGAAGAAAACAATGGGCAGAGAATATCCATTATCCATGCATGATAACCGCACAGCACTGCAGCAATGTATTGATGTATATGACCAGGGTTCAGGCCGTAAGAAATGTCTGGATGAGCGTCGCCAGCATAACTCTCATTACAGCCTGCGCCATCATCATCATGGCACCCCGAGtctggttactgcagtaaagtGGGAAGACTCAGTTTATCAGAAGGACTTCCTGCCCAGACAGCAAATAGAGAGCAGAGAGGACAAAATCAGAAGGCGTTTCCCTAGAGATCACTCGGCGAGGTCTCAGGTGAACGCTGCGGCTCAGGCTGATCAGTGTTTTATGTGGTTTGGGAGGGATGACGCTAAACAGTTCACTCCTTTAAGTGTACTAGCAGACGCTAACCACTCATTAACTACCTGAATCAGAGACGGTCCGAACACAGTTAATGATTATGACACTGCAAAGGAATCTCTTAATAAGTGTGCTATTtgaccagcagaggtcagtgTGCTCATTGTTAATATTGTGCTTGCACCGTCATAAAATCTGAAGGGTTTCATTCTGTAAAGTGTTAAATGACATATACAGTGTATTATGACAACAGAAACTTAGTCagaatttgttatttttgttagtttcagggtgattataatgaaataaataaaaacgttaCACTT

Function

symbol description
tex36 Orthologous to human TEX36 (testis expressed 36).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-131127-586 Orthologous to human TEX36 (testis expressed 36).

Ensembl:

ensembl_id ENSDARG00000097920

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00023543 False 946 mRNA 0.42 4 8748655 8753354
TCONS_00024830 True 989 lncRNA 0.43 5 8748656 8754425

Neighbor

gene id symbol gene type direction distance location
XLOC_011908 ctbp2a coding downstream 20907 8595588 ~ 8727748 (-)
XLOC_011907 CU462878.2 coding downstream 155831 8574646 ~ 8592824 (-)
XLOC_011905 fzd3b coding downstream 178288 8498782 ~ 8570367 (-)
XLOC_011906 CU462878.1 coding downstream 225625 8522906 ~ 8523030 (-)
XLOC_011904 BX248131.1 coding downstream 381839 8366705 ~ 8366816 (-)
XLOC_011910 BX323450.1 coding upstream 6368 8760793 ~ 8799574 (-)
XLOC_011911 nkl.4 coding upstream 99683 8854108 ~ 8862424 (-)
XLOC_011912 nkl.3 coding upstream 125387 8879812 ~ 8886735 (-)
XLOC_011913 nkl.1 coding upstream 141958 8896383 ~ 8907682 (-)
XLOC_011914 zranb1b coding upstream 197024 8951449 ~ 8976307 (-)
XLOC_011901 NA non-coding downstream 565951 8181721 ~ 8182704 (-)
XLOC_011896 BX511121.1 non-coding downstream 1036716 7643531 ~ 7711939 (-)
XLOC_011895 NA non-coding downstream 1214337 7509058 ~ 7534318 (-)
XLOC_011915 CU855685.1 non-coding upstream 554450 9308875 ~ 9310710 (-)
XLOC_011916 NA non-coding upstream 955588 9710013 ~ 9710692 (-)
XLOC_011917 NA non-coding upstream 1134179 9888604 ~ 9893781 (-)
XLOC_011930 NA non-coding upstream 1925360 10679785 ~ 10686313 (-)

Expression


Co-expression Network