XLOC_012021 (hhipl1)


Basic Information

Item Value
gene id XLOC_012021
gene name hhipl1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 17939095 ~ 17948587 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00023729
CTTGCATAACTTTTACTTCCATGTATCTGAAGTTGGCAGCCAGGCTTTGAGCGTTATGTGGTATTTTTGCGACGTTTTTGGCCGTATATGGCAACcgccgtttattttattttatttgtctgcgTTTTGGATCGCACCTGCGATCCTGCATCCGCAATGTTTGGATTTTAAACCCCCCTTTCAGCCTCAACAGGAGCTTCAGTTTTGTCAAATGTATAAAAACTTTGGATGCTGTGACTATGCAAGAGACCAAGAACTGATGAAAAAATACTATCGGGTAATGGATAACTTTGATTATTATGGATATTCGAACTGTGCCTCGTACGTGCAGGATCTGCTGTGTCAGGAATGTTCTCCATatgctgctcacttgtttgatgCCGAAGACCCCAGTACGCCTTTACGGACAATACCTGGACTCTGTCCAGACTACTGCGCTCAATTCCATTCCAAGTGCAGGTCTTTTCTTACCTTATTGTCTGACGATCCACGTCTTGCAGAACTTGAGCATGACCAACGCAAGCTTTGTCAGTATTTAGAACTGGACGACCCAGATTACTGCTATCCTCATTTGCTGAGTAATGAACATTTGAACAAAAATCTGGGCCGCACTGCAGCAGACTCTGAGGGCTGTTTACAGTTATGTTTGGAAGAGGTAGCTAATGGACTCAGAAATCCTCTTGCCATGGTTCATGCCAATGATGGCACACACAGGTTTTTTGTTGCCGAACAAGTTGGCCTGGTCTGGGTGTACCTTCCAGATCAATCAAAGCTTGAAAAGCCCTTTCTAAACATCACAAAAGCCGTGTTGACATCTCCATGGGAAGGTGATGAACGAGGATTTTTGGGGCTCACCTTTCACCCCCGCTTTAAATACAATGGGAAACTGTATGTCTACTACTCTGTCGAAGTGGGCTTTGATGAGAGAATCCGTATCAGTGAGTTCCGTATCTCTTCTACGGATATGAATGTGGTGGATCACACTTCAGAGAGAATCATTTTAGAGATCGACGAACCTGCTTCTAATCACAATGGTGGGCAGCTTCTCTTCGCCGATGATGGATACTTATACATCTTCACTGGGGATGGCGGAATGGCAGGAGATCCATTTGGGAAATTTGGAAATGCTCAGAACAAATCTGCACTTTTGGGAAAGGTTCTTCGAATTGATGTAGATGACAATGAACGAGGGCCACTGTATAGAATCCCAGCGGACAATCCGTTTGTGCATGAACCCAAAGCTCGGCCAGAGGTGTATGCCTATGGTGTGAGGAACATGTGGAGATGTTCGGTAGACAGAGGAGATCCGATAACCAAGGAGGGACGAGGACGAATCTTTTGTGGGGATGTGGGCCAGAATAAGTATGAGGAGGTGGACATTGTGGAGAAGGGCCGGAATTATGGTTGGAGAGCAAAAGAAGGCTTCTCTTGTTATGACAAAAAACTTTGCGCCAACAGTTCCTTAGACGATGTTCTTCCAATTTACGCATATCCACACAAAATGGGTAAATCTGTCACTGGTGGATATGTGTACAGAGGCTGTGAAAATCCTAATTTAAATGGCTTGTACATATTTGGAGATTTCATGAGTGGACGTCTGATGAGTTTAAAGGAGAACAGACAGACTGGCAACTGGGAATACAATGAGATTTGCATGGGTATAGGTCTGACTTGTTCATTTCCAGGACTCATCAATAATTACTATCCATACATCATATCCTTTGCAGAGGATGAGGCAGGTGAACTATATTTTATGTCCACTGAAATACCAAGTGCAACATCTCCAACGGGTGTTGTGTATAAGATTGTTGACCCCTCAagACGTGCACCTCCAGGAAAATGTCATTATGAACCACATTCAGTTCGGGTTAAAAGCAACATTATACCATTTGAgccaaaagaaaCACTGATAGGAGTCCATATTCCAACAAAGCAGCCCAAACTATCAAACACAGAGGAACCTCCTCTTGTTACCACAAAAGACTGGCTTCGGGAGCTGCTAGACAACTTTAGGGAGGAAGATGGGCAGATCACCACAACACCATTCACCCCTACTACACCCAAACCTGTCAGGACATCCAGACAGCGGAAGGGCAGGCGCAGGAAGGGCAAGCACAAGAACGGAGCAGTGAGGCTGGTTGGGGATGAAGAGGGACAGAGGGATCGTGGAAGGGTTGAGGTTTACGCTAATGGAGAATGGGGGACCGTTTGTGACGACCTCTGGAACACCAAGAACGCCGTGGTGGTTTGTCGGCAGCTCGGGTTCCTCCATGCACTTAAAGCTGCCAAGCACGCAGAGTTTGGAGAGGGAACAGGGCTGAAGATTATTCTGGATGATGTGCAGTGCGAAGGGACGGAGGAAACTCTTTTGGACTGTCAGCATGCTGGGATTGGCACTCACAACTGTGCGCATTATGAAGACGCAGGGGTAGTGTGTGGAAATTCAGTTGCCAGCCTGCAATGACCTTAACAGATTCTGAAAAGAACCATTTAGTTGTGGcacatacatttgaagtcagaattattagcccccctgaattattagacaccctgtttattttttccccaatttctgtttaatggagagcagattttttcaacacatttctaaacataatagttttaataactcatctgtaataactgatttattttatctctgccatgatgacagtaaataaaatatgactagatatttttcaagacacttctatacagcttaaagtgacatttcaaggcttaactaggttaactaggcaggttagggtaattaggcaaattattgtataacgatggtttgttctgtagtttatcgagaaaaatatagcttaaaggggctaataatattgtgcctaaaatggtgtttaaaaaactaaaagctgcttttaatctagccaaaataaaacaaataagactttctctaaacgaaaaaaatattatcagtcatactgtgaaaatgtccttgctctgtcaaacatcatttggaaaatattttaaaaa

Function

symbol description
hhipl1 Predicted to enable catalytic activity and scavenger receptor activity. Located in cytoplasm. Orthologous to human HHIPL1 (HHIP like 1).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0003824 catalytic activity molecular_function
GO:0005044 scavenger receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-090306-3 Predicted to enable catalytic activity and scavenger receptor activity. Located in cytoplasm. Orthologous to human HHIPL1 (HHIP like 1).

Ensembl:

ensembl_id ENSDARG00000062501

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00023729 True 3000 mRNA 0.43 9 17939095 17948587

Neighbor

gene id symbol gene type direction distance location
XLOC_012020 CU855697.1 coding downstream 59386 17879594 ~ 17879709 (-)
XLOC_012019 CU855697.2 coding downstream 160012 17778968 ~ 17779083 (-)
XLOC_012018 slirp coding downstream 174294 17763167 ~ 17764801 (-)
XLOC_012017 adck1 coding downstream 179875 17491226 ~ 17759220 (-)
XLOC_012016 nrxn3a coding downstream 491193 17257310 ~ 17447902 (-)
XLOC_012022 NA coding upstream 77149 18025736 ~ 18030257 (-)
XLOC_012023 NA coding upstream 200195 18148782 ~ 18182558 (-)
XLOC_012024 BX465857.2 coding upstream 335362 18283949 ~ 18284063 (-)
XLOC_012025 BX510991.1 coding upstream 402139 18350726 ~ 18350845 (-)
XLOC_012026 vrk1 coding upstream 825374 18773961 ~ 18797245 (-)
XLOC_012014 CR381576.1 non-coding downstream 1086690 16852272 ~ 16852405 (-)
XLOC_012013 NA non-coding downstream 1197839 16733316 ~ 16741256 (-)
XLOC_012012 NA non-coding downstream 1370104 16564878 ~ 16568991 (-)
XLOC_012030 NA non-coding upstream 1282147 19230734 ~ 19398185 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000106_00671555_00680014 HHIPL1 coding CI01000106 null 670387 ~ 680014 (-)