XLOC_012017 (adck1)


Basic Information

Item Value
gene id XLOC_012017
gene name adck1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 17491226 ~ 17759220 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00023723
AAGTTGATTTGAGGTGTTTGAGGGACGGCtgatataaatgttgatttgttgtttttatttctgcagATCCTCACATGGCTGTTCGGCTGCTGAAGGTCTCATCTGTTGCCACTGCAGTGTTTGCATCATCAGGATTTTACCTGTACAGCAAAAATGTGGACTACAATGATCTCAGCATTGTCAGATTTGGCAGAGCAGCCGCGACTACGGCTGTCATCAGTTATGACTACCTCACCACTCTCAGGGATGTACAGTATGGGACAGAGGAGTACTGGGCTGTCAAATCAAAGGTTCACAGGCGCTCAGCGGAGAGGCTGCTGGACTTGTGTTGTGCGAACAGAGGCACCTTCATTAAAGTAGGCCAGCACCTGGGAGCCCTGGAGTACCTACTGCCTGAGGAGTACACCAGCACGCTGAAGATCCTGCACAGCAGAGCTCCGCACAGCAGCATGGAGCACATCAGACAGGTCATACGAGAAGACCTGGGGAAAGAGCTCAGCGATCTTTTCATCCAGTTTGACGAGACACCTCACGGGGCCGCGTCTCTCGCTCAGGTCCACAAAGCAGTACTTCCAGACGGGAGGACGGTGGCAGTGAAAGTACAACATCCCAAGGTCCAGCGCCAAAGCTCCAAGGACATTGTTGTGATGGAGtttcTCCTTCAGGTTGTCCACTGGTTGTTTCCAGACTTTGCCTTTATGTGGCTGGTGGAAGAGGCCAAGAAGAACATGCCCCTGGAGCTGGACTTCCTCAATGAGGGCCGCAATGCTGAGAAAATAGCAGACATGCTCAAGCAGTTCAGCTTTTTGAAGATCCCGAAGATTCACTGGGATCTTTCCACCAAACGTATTCTAACCATGGACTTTGCAGAGGGCGGTCAGGTCAACGACCGGGAGTACATGAGAAGACACGGCATCAATGTCAATGAGaTCTCCAGAAACCTGGGCAAGATATACAGCGAGATGATCTTCGTCAACGGCTTCGTGCACTGCGATCCTCACCCAGGCAACGTGCTGGTTCGAAAGAGTCCTGAAAGCAATAAAACGGAAATTGTGTTACTCGATCACGGCCTGTATCAGGTGCTGAACCAGGACTTCAGGCTGGACTACTGCAGGCTGTGGCAGAGTTTGATAAAGGGAGACCTGAAAGGCATCGAGCGCTACAGCAGGCGTCTGGGAGCTGGAGATCTGTACCCACTGTTCGCCTGCGTCCTCACCGCTCGCTCTTGGACATCAGTTAACGCCGGCATCAGTCAGACGCCTGTCACTCAGTCTGAGGATGTGGAGATCCGAACAAACGCGGCGCTGTACCTCCCTCAGATCAGTGAGCTGTTGAACAGGATTCCCCGACAGATGCTGCTGCTTCTGAAAACCAACGACCTGCTGAGAGGCATCGAGACCATCCTGCAGACCAGAGCCAGCTCCAGCTCCTTCATCAACATGTCCCGCTGCTGTACTCGAGCCGTTGCCAGGCACAAGAGGAGCAAAGCAAGCTCTCGGAGTCGGCGTGTGCGGATCTGGCTGTCTGAGCGCTGGTCTCTGTGCCAAATCAACCTGTATGAACTTGTGTTGTGGCTTCGCAGCTCTGCTTTGGCCAGATGCCTCTGTTATCTCCTTAACTGCCTACCACACACAAACTGAGAGGCTTGAACACACTCGGTTTTTAACGGAAGCTGACtgtaaaaagtcttttttttttttttataatgttttccACAGTCATGGAACTTGACTTACAGTGAGATTATGATGTGTCAAATCAAATTCTTCTTGCATGTTTTACGTCCTTgttaatatgttattttaaagtaCTGTGCTTTAGTATAATGCCTTGAACTGCGCATATGTCACATCTCAAAAATTCATGGAAATCTTTTATTTCCTAATCTCATACTGTTGATGAGAAGattaaatggtaacactttagattaaTGCTTCATTAgtttgttagttaatgtatttactagcaaTAACTAAGTACCAACAatcttttaaagcatttattaatcattgtttaacattaactaatgcattaataaaatccaaAGTCGTACTTGTTAACATTAGGTAAAACTGACTAGcttttttactttataaataacatGTTGTAATAACATTGACTAGTGTtaagaaagtaataaatataataataaatgtattacttttagtttatgttagtaaatccTAACATAACTAatggatcattattttaaagtgttactgattagacatttaaatatataacatctgtggcaaaaaataaaaaaaatatatatttattttaggactttttattgGGTAAacgggtgttttatttttattttttggtcatcCTGGCTCAATAAATGGGGGCATTTGTATTTATCTGTGTTTGTTTGGATTTTTccttttgtgaattttttttaatgggaAAATGTTTTCACATTAATGAAGGAAGCAGTCAGTAAGTTTAGGAGTATTGTGTTTTTAAACCTCACTGAATGCAACAGTTGAAGCTTTGAATAACATTCACTCTACAGTGTTGTCTACAACGGGTTATGGTGGCCAAGAAAATAAAGAGGTTAGTGGGTGTTGTTGTActattaataaaatactattgcAGTTTTTCTAAACTATTACatattattgcatctaaagaatTACATATtgctatattttctttttttcattgtcATTTTAGCTAAGGTGATACATTGTCTTCAATATAAATCACAAATAACTACAAATatcagaaaataaaagaaaattgttAACATAAATAGTGCTTACTCATCCAAAAAATAGGAAAatgcaaatacttttttaaaattaattaattaatttatttatttatttatttatttatttatttatttatttatttatttatttatttatttatttatttatttatttattattattgttattattgttattattattattattattattattaagttgtagtaatattaatattattattgtacttgTAAAATGTGTCGTGGAAGAAGACTATTTGttaacactttgttttgatggtccatttgagtattagtagactgtctgcgtAATATCTgctaatactgctccttcaacaaacatCTAACTGACTATAtgtaactttgcaagtacatgtcaacttacactaaccccaacctcacaatctacttataatctaatgagaattagttggcatgtaacttaaatttaagaaacggaccatcaaaataaagtgtgaccaacaattttttttttttttttttttttttgattaactaGATTAGGTATgggtttatatattaaataataataatgaataacaaatgttttagttATTGGATGAGAACT
>TCONS_00023724
CCATGATGCATTGCGCGCAAAGCACGTTGCGGTGTCAACGGAGACGTCAGAGTTGAAAGGTTACAGAGCGACACCGGTTAGTGGATGACAGCGTGAGAGTCAATGAAGATCCTCACATGGCTGTTCGGCTGCTGAAGGTCTCATCTGTTGCCACTGCAGTGTTTGCATCATCAGGATTTTACCTGTACAGCAAAAATGTGGACTACAATGATCTCAGCATTGTCAGATTTGGCAGAGCAGCCGCGACTACGGCTGTCATCAGTTATGACTACCTCACCACTCTCAGGGATGTACAGTATGGGACAGAGGAGTACTGGGCTGTCAAATCAAAGGTTCACAGGCGCTCAGCGGAGAGGCTGCTGGACTTGTGTTGTGCGAACAGAGGCACCTTCATTAAAGTAGGCCAGCACCTGGGAGCCCTGGAGTACCTACTGCCTGAGGAGTACACCAGCACGCTGAAGATCCTGCACAGCAGAGCTCCGCACAGCAGCATGGAGCACATCAGACAGGTCATACGAGAAGACCTGGGGAAAGAGCTCAGCGATCTTTTCATCCAGTTTGACGAGACACCTCACGGGGCCGCGTCTCTCGCTCAGGTCCACAAAGCAGTACTTCCAGACGGGAGGACGGTGGCAGTGAAAGTACAACATCCCAAGGTCCAGCGCCAAAGCTCCAAGGACATTGTTGTGATGGAGtttcTCCTTCAGGTTGTCCACTGGTTGTTTCCAGACTTTGCCTTTATGTGGCTGGTGGAAGAGGCCAAGAAGAACATGCCCCTGGAGCTGGACTTCCTCAATGAGGGCCGCAATGCTGAGAAAATAGCAGACATGCTCAAGCAGTTCAGCTTTTTGAAGATCCCGAAGATTCACTGGGATCTTTCCACCAAACGTATTCTAACCATGGACTTTGCAGAGGGCGGTCAGGTCAACGACCGGGAGTACATGAGAAGACACGGCATCAATGTCAATGAGaTCTCCAGAAACCTGGGCAAGATATACAGCGAGATGATCTTCGTCAACGGCTTCGTGCACTGCGATCCTCACCCAGGCAACGTGCTGGTTCGAAAGAGTCCTGAAAGCAATAAAACGGAAATTGTGTTACTCGATCACGGCCTGTATCAGGTGCTGAACCAGGACTTCAGGCTGGACTACTGCAGGCTGTGGCAGAGTTTGATAAAGGGAGACCTGAAAGGCATCGAGCGCTACAGCAGGCGTCTGGGAGCTGGAGATCTGTACCCACTGTTCGCCTGCGTCCTCACCGCTCGCTCTTGGACATCAGTTAACGCCGGCATCAGTCAGACGCCTGTCACTCAGTCTGAGGATGTGGAGATCCGAACAAACGCGGCGCTGTACCTCCCTCAGATCAGTGAGCTGTTGAACAGGATTCCCCGACAGATGCTGCTGCTTCTGAAAACCAACGACCTGCTGAGAGGCATCGAGACCATCCTGCAGACCAGAGCCAGCTCCAGCTCCTTCATCAACATGTCCCGCTGCTGTACTCGAGCCGTTGCCAGGCACAAGAGGAGCAAAGCAAGCTCTCGGAGTCGGCGTGTGCGGATCTGGCTGTCTGAGCGCTGGTCTCTGTGCCAAATCAACCTGTATGAACTTGTGTTGTGGCTTCGCAGCTCTGCTTTGGCCAGATGCCTCTGTTATCTCCTTAACTGCCTACCACACACAAACTGAGAGGCTTGAACACACTCGGTTTTTAACGGAAGCTGACtgtaaaaagtcttttttttttttttataatgttttccACAGTCATGGAACTTGACTTACAGTGAGATTATGATGTGTCAAATCAAATTCTTCTTGCATGTTTTACGTCCTTgttaatatgttattttaaagtaCTGTGCTTTAGTATAATGCCTTGAACTGCGCATATGTCACATCTCAAAAATTCATGGAAATCTTTTATTTCCTAATCTCATACTGTTGATGAGAAGattaaatggtaacactttagattaaTGCTTCATTAgtttgttagttaatgtatttactagcaaTAACTAAGTACCAACAatcttttaaagcatttattaatcattgtttaacattaactaatgcattaataaaatccaaAGTCGTACTTGTTAACATTAGGTAAAACTGACTAGcttttttactttataaataacatGTTGTAATAACATTGACTAGTGTtaagaaagtaataaatataataataaatgtattacttttagtttatgttagtaaatccTAACATAACTAatggatcattattttaaagtgttactgattagacatttaaatatataacatctgtggcaaaaaataaaaaaaatatatatttattttaggactttttattgGGTAAacgggtgttttatttttattttttggtcatcCTGGCTCAATAAATGGGGGCATTTGTATTTA
>TCONS_00023725
GGATGACAGCGTGAGAGTCAATGAAGATCCTCACATGGCTGTTCGGCTGCTGAAGGTCTCATCTGTTGCCACTGCAGTGTTTGCATCATCAGGATTTTACCTGTACAGCAAAAATGTGGACTACAATGATCTCAGCATTGTCAGATTTGGCAGAGCAGCCGCGACTACGGCTGTCATCAGTTATGACTACCTCACCACTCTCAGGGATGTACAGTATGGGACAGAGGAGTACTGGGCTGTCAAATCAAAGCTGATGTGTCCTGATAATGCATTCTATGAAAAGTAAGGAAAAGCACCCCCCCCCAATGTCAGTGTGACTCCAGTGAAAGTAGCCCAGCAGTGAGAGTGAGATGGGAGAGATTATGTCTGTTATCTGCTTCTGGAAAGACCACCGGTGAACATTGCTGACACCCAAACTCCAGGCTGCTGTGTTGTGCCTGATTAGACACACTTTAAACATTGTTCTCTCCCCAGTTGCTGATGCTATTTTTGTTTTCTGTCATGTATTTTGGAAGTAAAGAAGTCATTAGACTGCTGGGTACTTCAAATGGttaattaaaacttaatttaaaac

Function

symbol description
adck1 Predicted to be involved in lipid homeostasis and mitochondrion organization. Predicted to be active in mitochondrial inner membrane. Predicted to be integral component of mitochondrial membrane. Orthologous to human ADCK1 (aarF domain containing kinase 1).

GO:

id name namespace
GO:0007005 mitochondrion organization biological_process
GO:0055088 lipid homeostasis biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0032592 integral component of mitochondrial membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-080401-5 Predicted to be involved in lipid homeostasis and mitochondrion organization. Predicted to be active in mitochondrial inner membrane. Predicted to be integral component of mitochondrial membrane. Orthologous to human ADCK1 (aarF domain containing kinase 1).

Ensembl:

ensembl_id ENSDARG00000062561

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00023723 False 3332 mRNA 0.39 10 17491226 17756344
TCONS_00023724 False 2405 mRNA 0.45 11 17492195 17759220
TCONS_00023725 True 574 mRNA 0.45 4 17746555 17759138

Neighbor

gene id symbol gene type direction distance location
XLOC_012016 nrxn3a coding downstream 43324 17257310 ~ 17447902 (-)
XLOC_012015 nrxn3a coding downstream 360284 16906523 ~ 17130942 (-)
XLOC_012014 CR381576.1 coding downstream 638821 16852272 ~ 16852405 (-)
XLOC_012013 NA coding downstream 749970 16733316 ~ 16741256 (-)
XLOC_012012 NA coding downstream 922235 16564878 ~ 16568991 (-)
XLOC_012018 slirp coding upstream 3947 17763167 ~ 17764801 (-)
XLOC_012019 CU855697.2 coding upstream 19748 17778968 ~ 17779083 (-)
XLOC_012020 CU855697.1 coding upstream 120374 17879594 ~ 17879709 (-)
XLOC_012021 hhipl1 coding upstream 179875 17939095 ~ 17948587 (-)
XLOC_012022 NA coding upstream 266516 18025736 ~ 18030257 (-)
XLOC_012008 NA non-coding downstream 1297606 16192479 ~ 16193620 (-)
XLOC_012006 NA non-coding downstream 1403291 16077835 ~ 16087935 (-)
XLOC_012023 NA non-coding upstream 389562 18148782 ~ 18182558 (-)
XLOC_012024 BX465857.2 non-coding upstream 524729 18283949 ~ 18284063 (-)

Expression


Co-expression Network