G384669


Basic Information

Item Value
gene id G384669
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000193
NCBI id null
chromosome length 643562
location 435939 ~ 441404 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU439940
GTACATGTAGATATATTAATAAAATACATGGATCTGTAATAAAATAATAATAAAAAATTGTCAACATGACTTCCCCAAACAAAACATTTTCCTTTCATTTTATAGCTATGCTTAAATAAATGATGTTACAGATGTTACAAAAACTGGAAATAACTTATTTTCCTATAGTGAAATCATCAGAATAAATACCTGACAAGAGTTCATGTATTGAATAACTGATTAGATATGATGATTTAGATGAGCCTACATGCTCTTGTGTCTCTCAGCAGCTTTGTCCTTATTGTTGTTCTTCAGTGTGTATGATGATATTTGGGGTTCCTGACGGTCACTCTTTAGTATCTCTGCTGCGGCAGATGATGTTGAAGGTCTGAGGAGCGCGGACAATACCCATGATCCCATCCATGTCCAGGGGCTGTGGATCCGGTGGCCAGGAGAAATGAATCCGCTGTAGGAGAGACGTGATGTACAGGAAGAGCTCCGTCCTCGCCAGTGTCTCGCCAAGACAGACCCTCGGACNNNNNNNNNNNNNNNNNNTTCCGGCTTGCTGAAGTGTCCGTTCTCATCCAGGAAATTCTCCGGGTTAAAGGAGTCGGGATGCTTCCAGTGCTCCTTATTGCTGAAAATTGCCGCAAAGTTTGCTAAGATCGTAGTTCCCTGTATGAGGAAAGTTCAGCAGAGTTCAATAAAGCTTTTTGCAAAACCCAGGGTAATTTATAACCTCCTATATCGTCCCATGTTTCATACTGGAATCAATTATAATGTACACTGGGTTAATGCTCTTACATGATATTATTACATACATATTTATATAAGATTCATTTAACTAAATGGACAAGTACAGCACACAACTTTATAGAATCTTAATATATAATATCTAGTCTAGTTTCTTTATCCTTACAGTTTAAATTACTAGTCAAAAAAATGCATGAACATTAAAATATTTGTGAAAGAATATAAAAATATAATCTCTTATTCTAGTCTCTTCATCCTTTTCCTTAAAGTGCATGAATACTTATTGTAGCTACTTAACCTCGCAATAAAAATGCTACCAGTCATAAATGACCAATTTATGACTGTGGTAGCATCTTTATTGCGAGGTCAACTGTATGAAAAGACTGTAAAAATCCTTAAAGCTTCATGTATATTATGTTGTTTGTCAACCGATTCATCAAAAAGATCTGAATATGAACGATTCGAACTGCCAAGGAAAAGCAAGGATGGAACGTGGATAACTAGACTCTAAATTTTCAGTGAGCAATTACTTAACTTCATTCATTTATCCAGGCTCCATTCATTACCTTGGGAATGTCGTATCCTCGTAGTTTTGTGGGCTGAATCGTTTCATGAATCACGCCAAATGGTACAATGTTGGCACAGCGTTGGATCTCGTGAACAGTGGCGTTGGTGTACGGTAGTTTGTCACGGTCATCCATGCTGGGCAAGCGGTCGTAACCCAGTACCCGAACAATCTCCTCATGACATCGATCTGTGTGAGATAAAAGGGAATTTGAAT
>TU439941
AAAATGTTTTTTTTTCAATTGCATGTCATTTTTTATTTGTAATAAAAGCATTTCACTATACAAATCATATACAGCTATGTGTTTTACATGTACATGTAGATATATTAATAAAATACATGGATCTGTAATAAAATAATAATAAAAAATTGTCAACATGACTTCCCCAAACAAAACATTTTCCTTTCATTTTATAGCTATGCTTAAATAAATGATGTTACAGATGTTACAAAAACTGGAAATAACTTATTTTCCTATAGTGAAATCATCAGAATAAATACCTGACAAGAGTTCATGTATTGAATAACTGATTAGATATGATGATTTAGATGAGCCTACATGCTCTTGTGTCTCTCAGCAGCTTTGTCCTTATTGTTGTTCTTCAGTGTGTATGATGATATTTGGGGTTCCTGACGGTCACTCTTTAGTATCTCTGCTGCGGCAGATGATGTTGAAGGTCTGAGGAGCGCGGACAATACCCATGATCCCATCCATGTCCAGGGGCTGTGGATCCGGTGGCCAGGAGAAATGAANNNTTCCGGCTTGCTGAAGTGTCCGTTCTCATCCAGGAAATTCTCCGGGTTAAAGGAGTCGGGATGCTTCCAGTGCTCCTTATTGCTGAAAATTGCCGCAAAGTTTGCTAAGATCGTAGTTCCCTGTATGAGGAAAGTTCAGCAGAGTTCAATAAAGCTTTTTGCAAAACCCAGGGTAATTTATAACCTCCTATATCGTCCCATGTTTCATACTGGAATCAATTATAATGTACACTGGGTTAATGCTCTTACATGATATTATTACATACATATTTATATAAGATTCATTTAACTAAATGGACAAGTACAGCACACAACTTTATAGAATCTTAATATATAATATCTAGTCTAGTTTCTTTATCCTTACAGTTTAAATTACTAGTCAAAAAAATGCATGAACATTAAAATATTTGTGAAAGAATATAAAAATATAATCTCTTATTCTAGTCTCTTCATCCTTTTCCTTAAAGTGCATGAATACTTATTGTAGCTACTTAACCTCGCAATAAAAATGCTACCAGTCATAAATGACCAATTTATGACTGTGGTAGCATCTTTATTGCGAGGTCAACTGTATGAAAAGACTGTAAAAATCCTTAAAGCTTCATGTATATTATGTTGTTTGTCAACCGATTCATCAAAAAGATCTGAATATGAACGATTCGAACTGCCAAGGAAAAGCAAGGATGGAACGTGGATAACTAGACTCTAAATTTTCAGTGAGCAATTACTTAACTTCATTCATTTATCCAGGCTCCATTCATTACCTTGGGAATGTCGTATCCTCGTAGTTTTGTGGGCTGAATCGTTTCATGAATCACGCCAAATGGTACAATGTTGGCACAGCGTTGGATCTCGTGAACAGTGGCGTTGGTGTACGGTAGTTTGTCACGGTCATCCATGCTGGGCAAGCGGTCGTAACCCAGTACCCGAACAATCTCCTCATGACATCGATCTGTGTGAGATAAAAGGGAATTTGAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU439940 False 1513 lncRNA 0.37 2 435939 438261
TU439941 True 1512 lncRNA 0.36 3 435939 441404

Neighbor

gene id symbol gene type direction distance location
CI01000193_00380544_00386196 GPX7 coding downstream 49743 380295 ~ 386196 (-)
CI01000193_00289289_00334600 SLC1A7A, SLC1A7B, SLC1A7 coding downstream 101339 287342 ~ 334600 (-)
CI01000193_00127434_00155049 NA coding downstream 280677 126958 ~ 155262 (-)
CI01000193_00099572_00117203 NA coding downstream 317218 99471 ~ 118721 (-)
CI01000193_00088221_00095804 TGM2A coding downstream 339492 87952 ~ 96447 (-)
CI01000193_00575632_00581576 NA coding upstream 132142 573546 ~ 581576 (-)
CI01000193_00586342_00606202 PFKFB2A, PFKFB2B coding upstream 144896 584798 ~ 606202 (-)
CI01000193_00621577_00638948 NA coding upstream 180038 616440 ~ 638990 (-)
G384662 NA non-coding downstream 42818 387853 ~ 393121 (-)
G384613 NA non-coding downstream 159068 275239 ~ 276871 (-)
G384555 NA non-coding downstream 404357 30418 ~ 31582 (-)
G384676 NA non-coding upstream 9031 450435 ~ 450761 (-)
G384715 NA non-coding upstream 83053 524457 ~ 524757 (-)
G384717 NA non-coding upstream 85590 526994 ~ 527223 (-)
G384718 NA non-coding upstream 86503 527907 ~ 528113 (-)
G384719 NA non-coding upstream 87123 528527 ~ 528765 (-)
G384658 NA other downstream 6646 389610 ~ 429293 (-)

Expression


Co-expression Network