G388477


Basic Information

Item Value
gene id G388477
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000203
NCBI id null
chromosome length 933177
location 171163 ~ 172264 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU444713
TCTGATAGAAAGGTGTCAGAATACACAGTGCATCAGTTTGTTGCGTATGGAGCTGCATAGACACAGACCAGTCAGGGTGCCCATGCTGACCCCTGTCCACCGTCGAAAGAGCCAACAGTGGACACGTGAGCATCAGAACTGGACCACGGAGCAATGGAAGAAGGTGGCCTGGTCTGATGAATCACGTTTTCTTTTACATCACGTGGATGGCCGGGTGCGTGTGCGTCTCTTACCTGGGGAACACATGACACCAGGATGCACTATGGGAAGAAGACAAGCCGGCGGAGGCAGTGTGATGCTTTGGGCAATGTTCTGCTGGGAAACCTTGGGTCCTGCCATCCATGTGGATGTTACTTTGACACGTACCACCTACCTAAGCATTGTTGAGACCATGTACACCCTTTCATGGAAACAGTATTCCCTGGTGGCTGTGGCCTCTTTCAGCAGGATAATGCTCCTGACACAAAGCAAAAATGGTTCAGGAATGGTTTGAGGAGCACAACAACGAGTTTGAGGTGTTGACTTGGCCTCCAAATTCCCCAGATCTCAATCCAATCGAGCATCTGTGGGATGTGCTGAACAAACAAGTCCGATCCATGGAGGCTCCACCTCACAACTTACAGGACTTAAAGGATCTGCTGCTAACATCTTGGTGTCAGATACCACAGCACACCTTCAGGGGTCTAGTGGAGTCCATGCCTCGACGGGTCAGGGCTGTTTTGGCAC
>TU444714
TCTGATAGAAAGGTGTCAGAATACACAGTGCATCAGTTTGTTGCGTATGGAGCTGCATAGACACAGACCAGTCAGGGTGCCCATGCTGACCCCTGTCCACCGTCGAAAGAGCCAACAGTGGACACGTGAGCATCAGAACTGGACCACGGAGCAATGGAAGAAGGTGGCCTGGTCTGATGAATCACGTTTTCTTTTACATCACGTGGATGGCCGGGTGCGTGTGCGTCTCTTACCTGGGGAACACATGACACCAGGATGCACTATGGGAAGAAGACAAGCCGGCGGAGGCAGTGTGATGCTTTGGGCAATGTTCTGCTGGGAAACCTTGGGTCCTGCCATCCATGTGGATGTTACTTTGACACGTACCACCTACCTAAGCATTGTTGAGACCATGTACACCCTTTCATGGAAACAGTATTCCCTGGTGGCTGTGGCCTCTTTCAGCAGGATAATGCTCCTGACACAAAGCAAAAATGGTTCAGGAATGGTTTGAGGAGCACAACAACGAGTTTGAGGTGTTGACTTGGCCTCCAAATTCCCCAGATCTCAATCCAATCGAGCATCTGTGGGATGTGCTGAACAAACAAGTCCGATCCATGGAGGCTCCACCTCACAACTTACAGGACTTAAAGGATCTGCTGCTAACATCTTGGTGTCAGATACCACAGCACACCTTCAGGGGTCTAGTGGAGTCCATGCCTCGACGGGTCAGGGCTGTTTTGGCAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU444713 False 726 TUCP 0.51 2 171163 172264
TU444714 True 726 TUCP 0.51 2 171163 172264

Neighbor

gene id symbol gene type direction distance location
CI01000203_00138806_00154529 KCNJ9, KCNJ6 coding downstream 16609 138561 ~ 154554 (-)
CI01000203_00132981_00136502 NA coding downstream 32651 130881 ~ 138512 (-)
CI01000203_00118686_00131344 NA coding downstream 39819 118686 ~ 131344 (-)
CI01000203_00103997_00118416 TTC3 coding downstream 52747 103867 ~ 118416 (-)
CI01000203_00086596_00095920 DYRK1A, DYRK1AA coding downstream 74991 84952 ~ 96172 (-)
CI01000203_00184424_00196181 ERG coding upstream 12018 184282 ~ 199866 (-)
CI01000203_00205967_00209724 NA coding upstream 33632 205896 ~ 212692 (-)
CI01000203_00229325_00233430 NA coding upstream 57032 229296 ~ 234414 (-)
CI01000203_00237223_00242867 NA coding upstream 64644 236908 ~ 243584 (-)
CI01000203_00270385_00283030 EMSY coding upstream 96897 269161 ~ 283030 (-)
G388460 NA non-coding downstream 36938 134047 ~ 134104 (-)
G388456 NA non-coding downstream 151448 17196 ~ 19715 (-)
G388470 NA non-coding upstream 54462 226726 ~ 227497 (-)
CI01000203_00294049_00335783 AKT2, AKT2L non-coding upstream 131373 293775 ~ 335783 (-)
G388500 NA non-coding upstream 166546 338810 ~ 339163 (-)
G388534 NA non-coding upstream 235411 407675 ~ 407917 (-)
G388547 NA non-coding upstream 287057 459321 ~ 459654 (-)
G388454 NA other upstream 44525 216789 ~ 218925 (-)
CI01000203_00287087_00290157 NHLRC3 other upstream 113448 285712 ~ 290157 (-)

Expression


Co-expression Network