G388454


Basic Information

Item Value
gene id G388454
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000203
NCBI id null
chromosome length 933177
location 216789 ~ 218925 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU444690
GTAAATAAGTAATAAAGTAATACATTTGATTAAATTAATTCAAAAAATGTATTTAAATAAATACATTTCGTAAAACTAAATAAATAAAATTTGATTAAATTATATAAAAATGTATTTAAAATTAAAATTATTTTAAAATTAGTAATAAGAAAAGCAAGTGTAACTAAATAAAATGATTAAAAAGACTAAAATAAATAAAATTGTATATAAATAAATAATAAATTAGCACATTTGATTAAAATAATTTGTTAAAATACATCTAACAGTACTACAGTACTACAGTGAGAAGAAAAAACAATGAAAAACACATTCATAATACTATCATAACTGCCTATTAAATGTTAGGAGGGGGTTTCTCATAATTGTAAAGTAACTCACCTCGTCGGGGTCGGTGAGTTTGAACTCCCAGCCGTCGCCCGTCCAGCTGATGATGCTCTGACAGTTCGTATCGGTCAACAGCTCCAGAAGGAACTGCCACAGCTGAATGGGGCCACTTCCTGTTGAGCATCAAAGACACGCAGGTTAAAGTCGAAGTCACAATAGTCTTTCCTTCCCTATTGTGACTTTAAATGACTTCAAATTTTCTCCCATGAAAATGTCACCTACTATTATGTGTTGGTTTTGCCCATTTTTAGTTTAAATCAGGTATTGCTTTACACAAACACTGCAACTGTGGGACTGTTTTAGTCAGAATCATCTGTACTAATGAAACGCACCGGTGAATCCAGCGAGCACCGCGGCGGGGATGACGGGTTTGCCCTGCTCCAGCGGCTCGTTCCTCTCCTGAACGTAGTCTTTGAAGGACAGTCCCTGTTTGCCCAGGCCCAGCGGAGCCGCTCCGAACTCCTCCTCAAAGCTGTCGTAGGACGGGACGCGCTGGGCGTCAGCGAGGGACGAATGGCTTCCCCAGGAGCGCAGGACGCACTCGGAGCCCTCCGCGTTCTCCACGCTCTCCACCGACGTCTGCTCACGTGACGAGACTGTAGAGAAAACGAGCGTTTGGTTACTACACACACTCCGTACATCAACTCGCTGTGACGACAAGTGTTGAGAAAGTTACTTTGAAAGTAATGCCTTACAATATTGTGTTACTCCCTAAAAAAAGTAACTAATTATGTTACTTAAGTTACTTTTTGTTACTTTTTCCTCACCTGGATGAGACTCGATCTCTTGCAGGTGTTTTATTTTACTGAGAAGTTCTTTTTTGCAATTGTTTAACAAACGGCCTATATAACACACTATATATACCTACTGTACAGCTCTTTATTGAACTTTACTCGTTACTTTACTCGTTACTTCAAAAAGTAATCTGATTACGTAATGCACGTTACTTGTAAAGCGTTATCCCCAACACTGATGACAACGGATGTGTGATATCTGACCTGCTGTATTGAGACGCTGAGCAGCTTTAGCGCCGGAGAACTCCTGACTCATATAGCTGACGCTGACGGTGCTGAGCTGAGGTTTGGGATACATGGAGAGCTCCTGACCGGACGCCAACAGGGCCGAATCATCAGAAACCTCGAAGAGCTCTCGGAGGAGACTGCTGCGACTATCAGGAACCTTCAAAGTACATTCCTCCAGACTGAGACCTTCAGACACAAACACACATCACACTGTAGTCTGATTACAAGATCGGTGTTGAAGATTCATTCAGAGTGATGGAAATCAGTGCATTACAACATACTGACTGACATACAGACGCAGTGATCGTAACACTTACTGCTGGAGCTGCTGCTCGTCCAGCCGCACTCAGACGGCCGACTCAAGACTTTAACCTCGTCTCCCTCCTGACAAGCTGCAGAAGAGCACATCGAATCAAACATCAGCTCCTGCATTACATCAAATCTAAATGTCTGCGACGAGAACGCTCCGTTACCTCTCATCATCTGCTCCAGATGTTCCCACAGAATATCGCCCACGAAATCTGGAGCCAGATCCAGGAATCCGTCCTTTCCCAGGTCGCACAGCTCCTGTCCGCCCATGTCGAACTTAAAGAAGTTGATGTTGGTCAGACTGAACTCTCCAGACGCCCAGAACAGCCACTGTGACACATGCTGTTTGGTCCACTTACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU444690 True 2075 TUCP 0.43 2 216789 218925

Neighbor

gene id symbol gene type direction distance location
CI01000203_00205967_00209724 NA coding downstream 4097 205896 ~ 212692 (-)
CI01000203_00184424_00196181 ERG coding downstream 16923 184282 ~ 199866 (-)
CI01000203_00138806_00154529 KCNJ9, KCNJ6 coding downstream 62235 138561 ~ 154554 (-)
CI01000203_00132981_00136502 NA coding downstream 78277 130881 ~ 138512 (-)
CI01000203_00118686_00131344 NA coding downstream 85445 118686 ~ 131344 (-)
CI01000203_00229325_00233430 NA coding upstream 10371 229296 ~ 234414 (-)
CI01000203_00237223_00242867 NA coding upstream 17983 236908 ~ 243584 (-)
CI01000203_00270385_00283030 EMSY coding upstream 50236 269161 ~ 283030 (-)
CI01000203_00287087_00290157 NHLRC3 coding upstream 67284 285712 ~ 290157 (-)
CI01000203_00294049_00335783 AKT2, AKT2L coding upstream 74850 293775 ~ 335783 (-)
G388469 NA non-coding downstream 36325 155391 ~ 180464 (-)
G388460 NA non-coding downstream 82564 134047 ~ 134104 (-)
G388456 NA non-coding downstream 197074 17196 ~ 19715 (-)
G388470 NA non-coding upstream 7801 226726 ~ 227497 (-)
G388500 NA non-coding upstream 119885 338810 ~ 339163 (-)
G388534 NA non-coding upstream 188750 407675 ~ 407917 (-)
G388547 NA non-coding upstream 240396 459321 ~ 459654 (-)
G388477 NA other downstream 44525 171163 ~ 172264 (-)

Expression


Co-expression Network