Fish Transcriptome and Expression Database

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model fish

XLOC_012265 (CR382330.1)

Basic Information

Item	Value
gene id	XLOC_012265
gene name	CR382330.1
gene type	non-coding
species	zebrafish (Danio rerio)
category of species	model fish

Chromosome Information

Item	Value
chromosome id	NC_007128.7
NCBI id	CM002901.2
chromosome length	53461100
location	37309329 ~ 37309446 (-)
genome version	GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00024168
TATTACAGCCATATCACCATGCAGCCTAAGAccggttacttactgaagctaaaCAGTGCTGAGCATGGtcggtacctggatgggagaccacatggaaaaaactagattgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id

ENSDARG00000109346

RNA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
TCONS_00024168	True	118	rRNA	0.46	1	37309329	37309446

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

gene id	symbol	gene type	direction	distance	location
XLOC_012264	ptgr2	coding	downstream	9935	37287852 ~ 37299394 (-)
XLOC_012263	kif3cb	coding	downstream	95133	37204229 ~ 37214196 (-)
XLOC_012262	asxl2	coding	downstream	113975	37162571 ~ 37195354 (-)
XLOC_012261	dtnbb	coding	downstream	152809	37070096 ~ 37156520 (-)
XLOC_012259	dnmt3ab	coding	downstream	254370	36936918 ~ 37054959 (-)
XLOC_012266	si:ch211-180n24.3	coding	upstream	1216	37310662 ~ 37312922 (-)
XLOC_012267	NA	coding	upstream	53578	37363024 ~ 37365357 (-)
XLOC_012268	crip1	coding	upstream	76365	37385811 ~ 37395496 (-)
XLOC_012269	CR382330.2	coding	upstream	80557	37390003 ~ 37390117 (-)
XLOC_012270	crip2	coding	upstream	136079	37445525 ~ 37474689 (-)
XLOC_012260	BX571720.1	non-coding	downstream	358774	36950438 ~ 36950555 (-)
XLOC_012253	BX649242.1	non-coding	downstream	633452	36673484 ~ 36675877 (-)
XLOC_012252	CR354585.1	non-coding	downstream	674140	36635072 ~ 36635189 (-)
XLOC_012250	NA	non-coding	downstream	795393	36482587 ~ 36513936 (-)
XLOC_012249	NA	non-coding	downstream	832595	36446514 ~ 36476734 (-)
XLOC_012271	NA	non-coding	upstream	459195	37768641 ~ 37771340 (-)
XLOC_012273	NA	non-coding	upstream	713697	38023143 ~ 38026611 (-)
XLOC_012276	NA	non-coding	upstream	1403180	38712626 ~ 38714935 (-)

Expression

Co-expression Network