XLOC_012253 (BX649242.1)



Basic Information


Item Value
gene id XLOC_012253
gene name BX649242.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 36673484 ~ 36675877 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00024141
AATGTTCCAATCGACACAATCAATCCGTTTGTGAAAACAAGTTCGAGTTCAGTTGCTCTAAATGATTATACAGATTTGGaactttagaagaaaatatttatttaattaatcatgtGTGTACTTCCCCTTTAAGGGGATGTTGGTTTAATGACGCTCAGAAATTCGGAAGTTCTGGGTTTTTGAAAGAATTATGCTGCACCTAGCTCTGTAGGTTCATATGTCGATTTGTTAACCTCATAAGGATCGTTTGTAAATACATGAAGGCCTCCTACAAGCGCGCGGTGCTCGAAGGAAGATGATCATTAACGCTGTAGCGCGTGATACGATTTTAAAACATGATTATGGAAGCGCTCGACTATCTCAATATAATCTCCCACGGTGGATTGCAGCCTCAGCAGAAAACCAGTGAGATTCGCACGTCAAGGAATTTGTGAATATGGTTTTGCGAGTTGTCTGGGGATCTGGGAAAGGAATGACAGACTCTCATCAATCTTCAAGCAGTTTTTTTCATGGAGACTTGCCAAGTCTTGACAAACAAAGAAGCAAGGTAAAAACAA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097318

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00024141 True 557 lncRNA 0.40 2 36673484 36675877

Neighbor


gene id symbol gene type direction distance location
XLOC_012252 CR354585.1 coding downstream 38295 36635072 ~ 36635189 (-)
XLOC_012251 colec11 coding downstream 144035 36516695 ~ 36529449 (-)
XLOC_012250 NA coding downstream 159548 36482587 ~ 36513936 (-)
XLOC_012249 NA coding downstream 196750 36446514 ~ 36476734 (-)
XLOC_012248 AL929378.2 coding downstream 332905 35901065 ~ 36340579 (-)
XLOC_012254 myo6b coding upstream 11217 36687094 ~ 36842267 (-)
XLOC_012255 senp6b coding upstream 172909 36848786 ~ 36860988 (-)
XLOC_012256 mapre3a coding upstream 191404 36867281 ~ 36896560 (-)
XLOC_012257 dpysl5a coding upstream 222997 36898874 ~ 36936856 (-)
XLOC_012258 BX571720.2 coding upstream 225913 36901790 ~ 36904838 (-)
XLOC_012245 BX255944.2 non-coding downstream 827228 35554571 ~ 35846256 (-)
XLOC_012260 BX571720.1 non-coding upstream 274561 36950438 ~ 36950555 (-)
XLOC_012265 CR382330.1 non-coding upstream 633452 37309329 ~ 37309446 (-)
XLOC_012267 NA non-coding upstream 687147 37363024 ~ 37365357 (-)
XLOC_012269 CR382330.2 non-coding upstream 714126 37390003 ~ 37390117 (-)
XLOC_012271 NA non-coding upstream 1092764 37768641 ~ 37771340 (-)

Expression



Co-expression Network