CI01000299_03341031_03366645 (KLF7, KLF7A, KLF7B)


Basic Information

Item Value
gene id CI01000299_03341031_03366645
gene name KLF7, KLF7A, KLF7B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 3340766 ~ 3366728 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_03341031_03366645.mRNA
ATCTGATTCCTCAGAGCCGCACTGGGAATCTCCCCACACCAGGCCTGTTGCACTGTGTCGAATGTGCGCTGCATAACAACACAATGGCTCGCTGTAGAGGGATGTTCACTGCCAGCTTACCCAACCTGAACCCTTTGATCCTGCCCTTTGTAATGCAAATCAAAAGAAGGGGAGAGCAGGACACCAGGGAGAATCTTCATGATGGTACCATGTTTCATGCTGATGTGTGCAGTTGTCAATTTCTCACTCAAAATTTGGACTACACAGTTAATCTTGATGGGTTCGAGAAGCATACTGAATTGCGCAGGGCTCTTCAGGATCCATTTCACGAGTGCCAGCTTTGCCTTTATGGTTACTTAAAGGTGTCAGGAGGCATTAGCCTACATTCAGCTAACGGCTGCACTCAGATAATCTTCCTGCAGATGAGATGTAGGTTATTTTTAGGCGCCGCCTGGCGAGGCTGTAAATGGGAGGCAGGGCGAGTTTTGAGGGCCACTGTTGATGAGATCACACATGGCCCCATCATTCCCCCCGTCCTATCGATCGACCGCGGCCTGAAGGGGGATTGTGTCTCAGGGTGCCGCCAGCTGGCCAGTCCCTTCCTGAATCAAAGCACTGGCAGATCAATGACTGATCAGAGAACAGGCTGGATGAGTTTCACTTCTAAGCCCATCCGTCAGGAGGGTGTCATTGGAGTGCACAGATGCAGAAAAGATAATTGCACGGCGGGTTCGACTATGAGAGACAGACGTGTCTACATCGCCCTATCGCGAGCCAGGTTCGTCACTTTACAGATGATAGATCGCCACCAAACCCGCGGCGAGGAACAGCTGCGCTCGCTGCGGGGCACGTCACAGATGACTCACTTTATCAGTTCCAAGCTCTCGATGTTTGACAGTCGCTCCTTCCACGACGTGACATGCTTGGAGTTGGAACGCTATCTGCAGACAGAACCCAAACGGCTGTCTGACCTTTTCGACGAGGAACTGGACGGCCTCCTTACCCCCTCCTTCATGAAGGAAGACGGCGATGAAGACCTGTTAGACCCCCTCCTTCCCAGCCTCAACAACCCGCCTAGTCCTCCTCCTCCTCACCTCACCCCACGCAAAGAAACCGTCTCCTCCACTTCCTCTACTGTGACCTCTCCAGACATCACCTTAGGGGTCAACGCAGCCCAGCTGAACGCCGTCACCTCCCTAACGCCTCCCTCATCCCCAGAACTGGGCCGTCACTTAGTCAAACCCACCCACACACTTAGTGCCTCGCCCGACGGGACTCTCACGCTCAAGCTAGTGGCCCGAAAGGTGGGCTTGAGTTCTGCCAAGCTCGTGGCTGCTCACCCGGTGCCGCTCTCTCCCCAGCATGGCAGCAGCGGCGCACAGAGCGACGGGGAACAGGGTGGCACCTTCACCATGGGGGCTGGCGAGATGGCAGAGAACAAGAAGAGGGTCCATCGCTGCCAGTTCAATGGCTGTCGGAAAGTCTACACCAAGAGTTCACATCTGAAGGCACATCAGAGGACACATACAGCTCAGAATGAAAGTGTGGCCGTCATGGAAGATTCTTCACGCTATAAAAACAAAGATCCAAATAAACTCTGCCTGCCCCCCATTTCATACGTTACGTTCAGCAGCGCTAATGAACAAGCTACGACAGCCCATACGAACCACAGGCGGCTGCCATCCACAACGAAAAACATACAACATCAAAAATGGGAACGCAGTCTCTCACATCTGTTAAACGCAGCAAAGATCCCATTGGAAACTCAGAGGGAGAAGCCTTACAAGTGCTCATGGGAAGGCTGTGAATGGCGGTTCGCGAGAAGCGACGAGTTGACGAGGCACTACCGCAAACACACCGGCGCCAAGCCTTTCAAGTGCAATCACTGCGACAGGCCCCTTCTTAATCCGTCCCGACCGCGTCCGGACCCCCTGTCAGGACAGTGGGGTGGGGGTGTGGAAGAGGGTGGAGGTACACCAGCTGGTTTGGTGCCTCCTGGCAGTGGCTTGATCTGCCATCTGTCCGACCCTGCCAAAAACATACCCATTGATTTTCCCAATTCGTGCTCCTCCCCTTGCTCGTTCCAGGACAGGTGAGACTTAGCATGAAAGCATATGTCCAAGATGCTCCAACAATCAACTAGTCAAGTTTATCTAGATTTATCTTTGCACTTAGCAATTGCCTAACAACACTAAATTCACTCTGACAATGTTCTGACAACCCAGAACACCCTAACAACTGCCTAGTGAGTTTTGCCACTATGGAATTAATTAGTTTGTTTGTTTTTTAATTGATTGACAGCACTATTTATACATTAAATTTGACATTAGGCATAGTTATTCATACAGTGTTATAAATAAA

Function

symbol description
klf7b Enables cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within optic nerve formation. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in nervous system; neural rod; and trigeminal placode. Orthologous to human KLF7 (Kruppel like factor 7).
klf7a Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Is expressed in brain and olfactory system. Orthologous to human KLF7 (Kruppel like factor 7).
klf7 Enables DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in several processes, including negative regulation of adipose tissue development; negative regulation of insulin secretion involved in cellular response to glucose stimulus; and regulation of transcription by RNA polymerase II. Located in cytosol and nucleoplasm.

NR:

description
unnamed protein product, partial

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K09207 KLF6_7; krueppel-like factor 6/7

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_03341031_03366645.mRNA True 2361 mRNA 0.52 11 3340766 3366728

Neighbor

gene id symbol gene type direction distance location
CI01000299_03206204_03214303 MDH1B coding downstream 126463 3206185 ~ 3214303 (-)
CI01000299_03104921_03106385 NA coding downstream 234381 3104605 ~ 3106385 (-)
CI01000299_02951402_03057288 PARD3BA coding downstream 283478 2951402 ~ 3057288 (-)
CI01000299_02891830_02905146 NRP2B, NRP2A, NRP2 coding downstream 435620 2891574 ~ 2905146 (-)
CI01000299_02850281_02876863 NRP2A, NRP2 coding downstream 463903 2850281 ~ 2876863 (-)
CI01000299_03492360_03492614 NA coding upstream 125486 3492214 ~ 3493144 (-)
CI01000299_04136702_04142005 NA coding upstream 768092 4134820 ~ 4142125 (-)
CI01000299_04158468_04164223 MX2, MX1, MXB, MX, MXA coding upstream 791273 4158001 ~ 4164715 (-)
CI01000299_04171373_04175441 NA coding upstream 804421 4171149 ~ 4175441 (-)
CI01000299_04186183_04196219 MX1, MXB, MXA coding upstream 818239 4184967 ~ 4197884 (-)
G406927 NA non-coding downstream 5559 3334043 ~ 3335207 (-)
G406941 NA non-coding downstream 24320 3312383 ~ 3316446 (-)
G406942 NA non-coding downstream 35576 3303752 ~ 3305190 (-)
G406932 NA non-coding downstream 45629 3289462 ~ 3295137 (-)
G406912 NA non-coding downstream 100918 3239309 ~ 3239848 (-)
G406928 NA non-coding upstream 7192 3373920 ~ 3401249 (-)
G406971 NA non-coding upstream 48275 3415003 ~ 3415287 (-)
G406972 NA non-coding upstream 51356 3418084 ~ 3418322 (-)
G406978 NA non-coding upstream 70059 3436787 ~ 3437005 (-)
G406982 NA non-coding upstream 75360 3442088 ~ 3442324 (-)
G405053 NA other downstream 1322716 2017687 ~ 2018050 (-)
G404976 NA other downstream 1459778 1855639 ~ 1880988 (-)
G404784 NA other downstream 1680766 1659655 ~ 1660000 (-)
G404372 NA other downstream 2264875 1070607 ~ 1075891 (-)
CI01000299_00670925_00672195 NA other downstream 2667910 670680 ~ 673625 (-)
G407413 NA other upstream 1109266 4475994 ~ 4550721 (-)
CI01000299_04913779_04927715 NA other upstream 1559240 4913373 ~ 4927715 (-)
CI01000299_05428160_05443433 APP, APPA other upstream 2074609 5427661 ~ 5443433 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_000972 klf7a coding NC_007112.7 CM002885.2 6403551 ~ 6494384 (-)