CI01000299_05946615_05949088


Basic Information

Item Value
gene id CI01000299_05946615_05949088
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 5946333 ~ 5949234 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_05946615_05949088.mRNA
ACTGAACGCTCGAGCTGTAATATAACTGTGATGTTGTAGTACAGGTTTTCAGTCAAGACCCGTTTGATGTAACATTTCTGTTGTGTTTGTTCTGAGTGAGCTTGTCAGAATTGAAGTCTTCTGTTATGATCAAACCGCTGAAGAAAATGATTCACCTGATTTTCCTCTATTTGTGCTTGTGGTGTTTAGTTGGTGTGTTCGGTGTTGATGCAGTGAAGTCGGTGTCAGTGTTGGAGGGAAAATCAGTCACTCTAAACCCTGATCTTACTGAAATAGGGGGAAATAAAGAGATCGAGTGGAAGTTTGGACACAAGAACATCCTCATAGCTCAAATCAACAGGCAGAACAATAAAGACACGTTTTATGATGATGTTGCTGATGGGAGATTCAGAGGCAGACTGAAGCTGGATCAGACCGGATCTCTGACCATCACGAACACCAGAACCACAGACTCCGGACTTTATAAAGTCTTCAACACCAGAACAGATACCCTGCTGAGCACATTCAATCTTACAGTTTATGCTCCTCTACCTGCTCCTGTCATCAGCAAATACTCTCCTCAGTGTTCATCATCATCTTCATCGGTGTCCAAATGTGTGCTGCTGTGTTCAGCTGTGAATGTGAGTCATGTGACTCTCTCCTGGTACAAAGGAAGCAGTTTATTGTCCGGCATCAGCGTGTCTGATCTCAGCGTCAGTCTCTCTCTACCTCTGGAGGTGGAACATCAGGATAAAAACACCTACAGCTGTGTGCTCAACAATCCCATCAGCTTTCGCGCTGAACAAGCGGACATCAGTCACCTCTGCTGGTCATGTTCAGACTCTCGCTGTTGTGGTTTCACTGAAGCTGCGATCCGATTGGTTCTCTCTGCTCTGGTGGGCGTGGCCGGGGCGGTCGTCCTGGTTTATGACATCAGATCCAGAAGTCTTCATCAGGAGAAGAGTGTGAAGAACGCTGCAACAAACACTGATCAACCAGATGTAGTTGTTTTTAAATGAATGGAGCCATTATATCACAAGAAATCTTTATCTCATTTTTATTATCGCAAGATTGATATATCATGTCTTTAATACTAACTTTAATACTTTAATTATAACGTGCGCTTAACGTTAATACATTTTGATACAGTGACCCTGCTGAAGCTCCATCTAGTGTTTTTTTACTGACATTTCTATATTTTATGGCATAAAAATCCTTAACAAAAAAAAAACTACTTCAACTAAATACTTCATGTTAGTTTTTGCATGTCAATGCATCTTTGTTTTATACTATAAAATAAA

Function

NR:

description
novel protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_05946615_05949088.mRNA True 1280 mRNA 0.41 4 5946333 5949234

Neighbor

gene id symbol gene type direction distance location
CI01000299_05927821_05933216 BLZF1 coding downstream 11501 5927314 ~ 5934832 (-)
CI01000299_05919510_05924061 TXNL4B, TXNL4B.S coding downstream 21705 5919128 ~ 5924628 (-)
CI01000299_05896205_05898855 NA coding downstream 47476 5896043 ~ 5898857 (-)
CI01000299_05856747_05860959 NA coding downstream 83347 5856716 ~ 5862986 (-)
CI01000299_05849494_05852270 NA coding downstream 93827 5849402 ~ 5852506 (-)
CI01000299_05974659_05985294 NA coding upstream 25157 5974391 ~ 5985606 (-)
CI01000299_06037407_06054548 TPP2 coding upstream 86983 6036217 ~ 6054548 (-)
CI01000299_06130943_06144384 NA coding upstream 179839 6129073 ~ 6144868 (-)
CI01000299_06145156_06154533 NA coding upstream 195721 6144955 ~ 6154533 (-)
CI01000299_06185794_06195015 GRK1A, GRK1 coding upstream 236254 6185488 ~ 6195015 (-)
G407827 NA non-coding downstream 308 5945375 ~ 5946025 (-)
G407858 NA non-coding downstream 15787 5929639 ~ 5930546 (-)
G407848 NA non-coding downstream 170792 5774249 ~ 5775541 (-)
G407764 NA non-coding downstream 306467 5634840 ~ 5639866 (-)
G407825 NA non-coding upstream 14446 5963680 ~ 5969556 (-)
G407881 NA non-coding upstream 69308 6018542 ~ 6023664 (-)
G407884 NA non-coding upstream 75791 6025025 ~ 6025802 (-)
G407885 NA non-coding upstream 76881 6026115 ~ 6026325 (-)
G407810 NA non-coding upstream 81042 6030276 ~ 6030985 (-)
G407805 NA other downstream 110344 5835889 ~ 5835989 (-)
CI01000299_05428160_05443433 APP, APPA other downstream 490225 5427661 ~ 5443433 (-)
CI01000299_04913779_04927715 NA other downstream 1017515 4913373 ~ 4927715 (-)
G407413 NA other downstream 1395612 4475994 ~ 4550721 (-)
CI01000299_06526127_06532048 CEP97 other upstream 582767 6526127 ~ 6532048 (-)

Expression


Co-expression Network