Gene
RNA
| Item | Value |
|---|---|
| gene id | G405049 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000299 |
| NCBI id | null |
| chromosome length | 6567443 |
| location | 2006176 ~ 2006729 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU465505 | True | 554 | lncRNA | 0.41 | 1 | 2006176 | 2006729 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000299_01693958_01696561 | SLITRK5 | coding | downstream | 308871 | 1692924 ~ 1697305 (-) |
| CI01000299_01419938_01421048 | NA | coding | downstream | 585128 | 1419529 ~ 1421048 (-) |
| CI01000299_01338052_01368900 | NA | coding | downstream | 636800 | 1337872 ~ 1369376 (-) |
| CI01000299_01222994_01268707 | NA | coding | downstream | 735850 | 1222859 ~ 1270326 (-) |
| CI01000299_01114487_01122666 | NA | coding | downstream | 881946 | 1113750 ~ 1124230 (-) |
| CI01000299_02670695_02682116 | NA | coding | upstream | 663867 | 2670596 ~ 2682116 (-) |
| CI01000299_02723315_02728716 | MNX2B | coding | upstream | 716491 | 2723220 ~ 2728753 (-) |
| CI01000299_02761916_02788258 | FN1B | coding | upstream | 754685 | 2761414 ~ 2788437 (-) |
| CI01000299_02833341_02845817 | NA | coding | upstream | 826361 | 2833090 ~ 2845870 (-) |
| CI01000299_02850281_02876863 | NRP2A, NRP2 | coding | upstream | 843552 | 2850281 ~ 2876863 (-) |
| G404800 | NA | non-coding | downstream | 299936 | 1706027 ~ 1706240 (-) |
| G404765 | NA | non-coding | downstream | 314895 | 1686047 ~ 1691281 (-) |
| G404778 | NA | non-coding | downstream | 370219 | 1635677 ~ 1635957 (-) |
| G404777 | NA | non-coding | downstream | 373840 | 1631896 ~ 1632336 (-) |
| G404772 | NA | non-coding | downstream | 401068 | 1604710 ~ 1605108 (-) |
| G405051 | NA | non-coding | upstream | 10355 | 2017084 ~ 2017314 (-) |
| G405067 | NA | non-coding | upstream | 22876 | 2029605 ~ 2030051 (-) |
| G405068 | NA | non-coding | upstream | 23472 | 2030201 ~ 2030437 (-) |
| G406539 | NA | non-coding | upstream | 50941 | 2057670 ~ 2057886 (-) |
| G406551 | NA | non-coding | upstream | 88314 | 2095043 ~ 2095356 (-) |
| G404976 | NA | other | downstream | 125188 | 1855639 ~ 1880988 (-) |
| G404784 | NA | other | downstream | 346176 | 1659655 ~ 1660000 (-) |
| G404372 | NA | other | downstream | 930285 | 1070607 ~ 1075891 (-) |
| CI01000299_00670925_00672195 | NA | other | downstream | 1333320 | 670680 ~ 673625 (-) |
| G405053 | NA | other | upstream | 10958 | 2017687 ~ 2018050 (-) |
| G407413 | NA | other | upstream | 2469265 | 4475994 ~ 4550721 (-) |
| CI01000299_04913779_04927715 | NA | other | upstream | 2919239 | 4913373 ~ 4927715 (-) |
| CI01000299_05428160_05443433 | APP, APPA | other | upstream | 3434608 | 5427661 ~ 5443433 (-) |
