CI01000300_11386936_11408339


Basic Information

Item Value
gene id CI01000300_11386936_11408339
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 11385906 ~ 11410245 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_11386936_11408339.mRNA
AGAATTAATGATTAACATGACATTTCCTAATGCCTCATGTGCCCTGCGCAGCACTGCATCAAAAAAGAATCATCTGACAGGACTGCGAGGAAAGAGAAAGATATTACTGAGCTAAACCTTTACAATTTGCCAGTTCAATTTACTTTGCTGTTTTCTTGTTCCTTTTACTGACAGTTCTCTAGAGCTGAATACCCAGATAATTTGACAATAAAAACAGAACACCAGATATGTTGGTGTAGAAAAGGCCCGCTATGCAGTAATAGAATAGAGACATAAGCGCCTGCTTGTGACTTAAAGATGCAGTATGACCTTTAATAGTTCAGTATTTACAGGACGCAGTTCAGAGTGCACGGATAGAGACTTTGCCAGTGTCTTGCTGTTGCTGTTACAGAGTGCATTCATATACCTGTAGTGAGTGACTTTGTTTATGTTATTTATTACCTTTGAAGAGCTGTATTCTGAATGTACTGTATATGTTTGATGTATCAGCAGTAGTTTCTATAATTATGTATGTGCGCCATGAGCAATGTCTATTGCATCATCTGTATCCAGCAATAGTGAATGCATATGAGAGATGGTTAAATAGTGATATTTGTATATAATATTGAGTATGTATATGCAATTATTTACTGTATAAGATTGTTCATCTTATATATGCCATATGTATTGATTCTCCCAAGCTCACGTCAGAAAATGTTGTATTATTCTAGGACCTACATGTCTAAATCGATCGCTATATGTCTATAAGTGACAGATTGAGTTAATTCCTGTTATTCTTGTTCATTTACTAATTGAGTATTGTTATATCTGTTTGTTTAGAATCACTTATTCAACACTGCACTCCAAACTACTCTGTACTACTCTGCCAAACCCTCTGCTACTTGTACTTTGCTTGTTCACTCAACCATGTATTAGGACTGTAAATGCCTCTACAAGCCTCAAGCCATTAAGGTATACTTTGTGACTGGACAACTCACCCCCTCACTAGTCTCCATACAAATGGTCCTTTGAGCCGGATTTGAGGAGCTGTCATAAGAATGATGCATCAGAGTGATCCAGATTCAGCCCACAGTTAGACCCAGCTGAACAGTGTGGTTCCCTAGTTACCTGTCAGACTTTAATATCACTGATCGTTACCAGAGGCCACAGTCACGACAAAGAGTAGATACTTCCCCTGAGATGAGTGACGATTCCAAATTGTGAGGAGCGGCTGCACCCAACCTCGCTGAGACCTCCCATAAGTATTGAGCAACTATGCAGCCATGGCAGCCTCTGATAGAGTGGAGTCCAAGAAAAGAGTTTCAACAACAGCAAGCACATACTTCCCCCCCCTCCCTGAGTAGTCATCATATGTCCTAGTTCCAGCAGTTGCGGAAGGAGACCGAAGAACTTCTTCGTCATTCCTATGAGCAGATAAGGAAAGTGGAGGAGAGGAATGAGGCTCTGGAAGCACAGATGAGCGTACTTGCAGTGAATGATTGGTCCAGTCACCATTCACAGAGTACATCCTCCCGTTTCTCAACTCTGCGTCCATACTCCACTGATCACTAAAGATGCTAAACCCATTCCTCTGCCTAGACGCAAGCTGCAGTGACATGCAAGTTAAAGCTCCTCACCCCAAGCCCAGAGACAGGAAGACAATCTGCCCATTTTGCGATGGTCAAGACCACTTCTTGAACAGGTGTGCCTGTTTCCAGAGATTGAACAGAGATCAGAAAGTTCAGTGGATACAATCACACAAGATATGTTGGTGTTGTGGAAAAGCCAATCAGGCCAAACACTGTTACCTCAAGACTCTCTGCAAGAGTTGTAATTGTCGATACTTGTACATCATCCACAAGGTTAATGACTAAGTCTTCGTGAAGATGCCTGAGACGCCTAAGGTCGGACCTTCTGCTTAGTGAACATGACCTCTGAGAAGGCGTACCTAGATTGGCCAACCGACAGCCCAGAAATCTTGTTGAAGATCTGTAAAGTACTCTTGAGAACTGGCAACCACTGCTTAAAGACTTACGCCCTATTGGATGACGGGTCCAAACGCAACATCCTACTTCATTCGGCTGCCCAGAAGCTCGGATTGATTGGTCGACCAGAAGAGCTTGTCTCTTACAGTCAGACAAGACCTCCACATCCTATACCACTCTGCAGAGATCCAGCACAAGCAGCAGCCTACCAGGTGGAGATAAACAAGTTAGAGGAGACAGGATATGCACAAATCATACCTCCCGACCAAGTGGACCAAGCTGAAGAGTTGTGGAGTGCAACTAGCCAGGTTATTGAAGTCAGAACTCAGTGTTCCCACACATACAGAAGTCACGCTCTGGTCAGATACCGTTACCGTGATGGCATAGATCCAAGCTCATTTAAAGTCTTTGTTGGCATGAGAGTAGCAGAGATACAGGAACTGACAGACCCAGAGGCCTGGCATTATGTCAATTCCAAGTCTAATTCTGCCAAAGACATCACAAGGGGCAAGATGTTAGCTGAGTTATCCAAGCTGATGGAATCAAGGCCCATTGTTCCTCCTCCTGCCCCTAGAACAGTGGCCTCAGAGTCCTCTCCTACAGCTACCTACTCAAAATGCAGAACTGAAACAAGTCACATTTTGTGGACATGCAGTTCTCATTACCAACCCAACCCTGCTGATTACAACCAGTTCAAATCTGATAAACAACTACTAGTGCTTAAGTCAGAGTCCTACACAAGGTTAGGTTACAACAGCAGGAATGAGGGAGTGCAAGTGGTAACACGAGGTACCATTGGGAGCGATGGCCCTCCTGTCAGTGCTGTGCAGATAACAGAGGTCAGCAGATGGAGGGTATTTAGGCTAAGTTCACATCCAAAAACAAACTGTCTCCCACACACAGTCACTACATCTACATCTGGATATGACTCAGCCACTCTCTCCAAGGGAACCTTGAGAATTGCTTATGGAACACTTTGGCTACCTAATAAAAATGTGGACTCTCAGAGCAGCCAAAATCCTATTCTGACTGACTACAGCTCGCAGTCAATAGATTGCGTAAGTGTTTGTGTGGGTGTGGTTGTGTGTCATCAAGACAGGGAGAAGCTAAGTTTGCTATGGGTCACAGCTGAGTCTATAGCTCTTTTGACTAAAATCAAGGACAAAAGATGTGAAATGGGGTCACTCTGAAGGAGGCATGAGGTTGTGATTGTCTGTCTATCATGCGTTTTTGTCCTTTATTATTATTTTTATGCATGTAGTTGTTTGATTGTTTGGATCATTTTTGTGTCCCATCTGGTTTTACATTCTTTTCATTCATTCATTCATGTTGGTTTACAACTTAAAAGTCTAATCTTATTTATTTATTTATTTATTTCTGTTAATGTGAATGGGAGCATACCCCCTGAGTGTGTACCTCCACTCCTGTCAGCAGATGTAGGCACTAATAACACACACAAGACCTTTATCAATACTCTTATGTATTCAATTTCAAAACAAGAACATGTTCACTCTTGTGTGTGTGATCAGAGAATGTAGCTCATGCTGTTTCCTTCTAGTAACTAATGTAGCCAGAGGCCTTTTTCAGGTCTAAGACACGTTGGGCTGTATGAATTAGCTGTGCGCTGAAATTCAAAAATGCATTAACAATTATTCTACACAGCCAGAGAAAGACCATATAATGCACCAAGATAAAAGATTAGTTCACTTTAAAATGAAATTTACCCCAAGATTTACTCACCCTCAAGCCTGATGAACACAATCGGAGGTATATTAATAAATATCCTGATGCATCCTAGCTTTATACTTGCAGTGAATGGGACCAACGAGTATGAAGATGATGAAAGTGCATCCATCCATCATAAACGTACTCCACATGGCTCTTACACTACATCCTACGCCTTCCGTATTCAATGCGACATCAGTTACATTTTTTTTGTAAGTTGAAAGAAGGCCTTTATTAACCCCCTGGAGCTGTATGGAGTATGTTTATGATGGATGGATGCACTTTCTTGAACTTCATACTCGTTCACTGCCATTATAAAGCGTGGACACGTGAGGATATTTATTAACATAACTCCAATTGTGTTCATCAGAAAGAAGAAAGTCATATACACCTAGGATGGCTTAAGGGCGAGTAAAGCTTGGGGTAATTTTCATTTTAAAGTAAACTAATCCTTTAAAAAAAAGCAGGCCTCTGCTTCACAATGATAATAATAAA

Function

NR:

description
hypothetical protein EH28_18286

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_11386936_11408339.mRNA True 4184 mRNA 0.42 8 11385906 11410245

Neighbor

gene id symbol gene type direction distance location
CI01000300_11149202_11277454 CNTLN coding downstream 108452 11149202 ~ 11277454 (-)
CI01000300_11081074_11090283 SH3GL2 coding downstream 295623 11080759 ~ 11090283 (-)
CI01000300_11064478_11065542 FOXE1 coding downstream 319159 11063944 ~ 11066747 (-)
CI01000300_11038957_11042631 TRMO coding downstream 343275 11038925 ~ 11042631 (-)
CI01000300_11031273_11033494 NA coding downstream 352112 11031250 ~ 11033794 (-)
CI01000300_11613478_11614473 NA coding upstream 203233 11613478 ~ 11614761 (-)
CI01000300_11614880_11616878 NA coding upstream 204573 11614818 ~ 11616878 (-)
CI01000300_11644496_11658653 NA coding upstream 234179 11644424 ~ 11658653 (-)
G415416 NA non-coding downstream 54321 11331166 ~ 11331585 (-)
G415388 NA non-coding downstream 96486 11289206 ~ 11289420 (-)
G415236 NA non-coding downstream 267893 11110603 ~ 11118013 (-)
G415330 NA non-coding downstream 342160 11043422 ~ 11043746 (-)
G415329 NA non-coding downstream 349873 11035701 ~ 11036033 (-)
G415493 NA non-coding upstream 64073 11474318 ~ 11475023 (-)
G415521 NA non-coding upstream 116911 11527156 ~ 11527359 (-)
G415529 NA non-coding upstream 138559 11548804 ~ 11549025 (-)
G415530 NA non-coding upstream 140511 11550756 ~ 11551039 (-)
G415534 NA non-coding upstream 154120 11564365 ~ 11564905 (-)
G414829 NA other downstream 679583 10706000 ~ 10706323 (-)
CI01000300_10698449_10700497 NA other downstream 685272 10696011 ~ 10701375 (-)
G414498 NA other downstream 1725101 9658049 ~ 9713722 (-)
CI01000300_08959695_08973598 UGDH, UGDH.L other downstream 2409906 8958963 ~ 8973750 (-)
G413140 NA other downstream 3239017 8146532 ~ 8146889 (-)

Expression


Co-expression Network